Gene detail information of Glyur000933s00028081 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G64750.1 | 8.00E-04 | Integrase-type DNA-binding superfamily protein |
| NR | XP_003523249.1 | 8.84E-17 | PREDICTED: ethylene-responsive transcription factor ABR1 [Glycine max] |
| trEMBL | tr|G7JAD3|G7JAD3_MEDTR | 1.00E-16 | AP2 domain class transcription factor {ECO:0000313|EMBL:AES72765.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00933 | 88991 | 90650 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.120 |
| SRR1783600 | control | 0.112 |
| SRR1783602 | moderate drought stress | 0.361 |
| SRR1811619 | moderate drought stress | 0.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.510 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.554 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.317 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.751 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.788 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.571 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.797 |
| SRR2868004 | Drought Stress (root) | 5.194 |
| SRR2967015 | Control (root) | 2.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.556 |
| SRR9715740 | Leaf | 0.561 |
| SRR9715741 | Leaf | 1.578 |
| SRR9715739 | Root | 0.359 |
| SRR9715742 | Root | 0.913 |
| SRR9715743 | Root | 1.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.427 |
| SRR8749028 | MeJA induced 9h | 17.900 |
| SRR8749029 | MeJA induced 9h | 11.740 |
| SRR8749030 | Uninduced | 34.074 |
| SRR8749031 | Uninduced | 39.838 |
| SRR8749032 | Uninduced | 20.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.712 |
| SRR8400027 | Control - Root | 3.932 |