Gene detail information of Glyur000933s00028075 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G09890.1 | 2.00E-11 | Protein of unknown function (DUF3511) |
| NR | XP_003528030.2 | 4.93E-33 | PREDICTED: uncharacterized protein LOC100795724 [Glycine max] |
| trEMBL | tr|I1KBD5|I1KBD5_SOYBN | 2.00E-33 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G15300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00933 | 69462 | 69734 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000933s00028075.1 | PF12023.3 | DUF3511 | 43 | 81 | 1.10E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.557 |
| SRR1783600 | control | 1.054 |
| SRR1783602 | moderate drought stress | 0.925 |
| SRR1811619 | moderate drought stress | 1.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.752 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.281 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.341 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.358 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.406 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.909 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.978 |
| SRR2868004 | Drought Stress (root) | 21.239 |
| SRR2967015 | Control (root) | 19.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.101 |
| SRR9715740 | Leaf | 18.853 |
| SRR9715741 | Leaf | 15.306 |
| SRR9715739 | Root | 6.578 |
| SRR9715742 | Root | 25.792 |
| SRR9715743 | Root | 27.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.556 |
| SRR8749028 | MeJA induced 9h | 1.062 |
| SRR8749029 | MeJA induced 9h | 0.704 |
| SRR8749030 | Uninduced | 0.528 |
| SRR8749031 | Uninduced | 0.215 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.092 |
| SRR8400027 | Control - Root | 16.459 |