Gene detail

Gene detail information of Glyur000933s00028073

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G54610.2	2.00E-122	Protein kinase superfamily protein
NR	XP_007137578.1	0	hypothetical protein PHAVU_009G138300g [Phaseolus vulgaris]
COG	YP_006979764.1	2.00E-24	kinase domain-containing protein [Propionibacterium acidipropionici ATCC 4875]
Swissprot	tr\|Q9ZVM9\|Y1461_ARATH	6.00E-150	Probable serine/threonine-protein kinase At1g54610
trEMBL	tr\|K7KLK4\|K7KLK4_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA04G39569.1}

Sequence

Transcript Sequence

>Glyur000933s00028073.1
CTTGTGAGAAAATGATTAGACGCTGCCGGTTTTCGTTAGGACCAGAGTTTCCATGTAATCCCCGATCATTAAATTTTTCATCCCAGCCTCAATCACCATTGACGGAGAAAGCATAGGTTTATAAGTCAGTTTCTTCTCTCCTTCGGTTGCATAATAATTCCAATAATAATCTTATAACCAGGCCAGCTTGGAAGTTAATTAGGAAGCTTCTTTAATTACCATGCTCTGGCACTGGTGAATCAGAACCCCTTCTCTTCCTTGTGTTTATATGACATGTCACCGAAACAGAGATATTAATCGCCATTATTCCAAGTTGCAATGGGATGCGTTTTTGGCAAGTTTTCTGATTCTCCGCCTCGCAAACCGAAGCGGCATGTGAAGAGAGTTTCCAGCCAGAAGAGTACGAGGAATAGTAAACGTTCCTCTAAGAATGTGGGGCTAAAGAGGGAGACATCGTCTCAGAGACCAAGAGTGGTGAGTAAGGACGTCTCAGCTTCGGAGAATGAAAGAAAGATTTCACATGACGTGAATGCTGCTGGTGGTGTTGTTGTTGTTGTGAGATCAAAAGAAGAAAAGGAAGAATCACATGTTGCTGTAGAAGAAGAGAAGAGGGAGATTGAGGAGAAGATGAAGAAGAAGAAGAAGATTATTTCTAGATATGATTTTGTTGACGGGTGGCCAAAGTGGTTGGTCGATAACATCCCCAGTGATGTTTTGGCTACTCTGGTTCCCAAGAGTGCTGATTCCTATGAAAAACTAGCCAAGATAGGACGGGGAACATATAGCAATGTGTATAAAGCCCGAGACAAGAGCACGGGAAAGATTGTTGCTTTGAAGAAGGTACGGTTTGACACATCGGATTCTGAGAGTATCAAGTTCATGGCAAGAGAGATCATGATACTGCAGACGCTGGATCATCCCAATGTCATTAAACTCGAAGGGCTTGCAACATCAAGGATGCAGTATAGCCTTTATCTGGTTTTTGAGTTCATGCAGTCAGATCTTACCCGAATTATCTCCCGCCCTGGGGAGAGACTCGCCGAGCCACAGATCAAGTGCTATATGCAGCAGTTGCTTTCTGGCCTCCAGCACTGTCACGAGAGGGGAGTTATGCACCGAGACATTAAAGCTTCAAACTTGTTAATTGACAAAAAAGGGGTGCTGAAAATTGGAGATTTTGGGTTAGCAAATTCTTTTGCCATTAAATCTGAAGGGCCTCTTACAAATAGAGTGGTGACACTTTGGTATAGAGCTCCTGAACTACTTCTAGGTTCTACTGATTATGATTATGGCATTGATCTCTGGAGTGCTGGATGCCTTTTGGCTGAGATGTTTGTTGGAAGACCAATTATGCCCGGCAGGAATGAGATTGAACAGCTCCACATGATCTTCAAACTTTGTGGTTCTCCATCAGAGAGTTACTGGAGAAAACTGAAGCTAACTACAAGCTACCGGCCGCCACAACATTACAAGCCTAGCTACCGGGAAGGCTTCCAAAATTTTCCTTCCTCTTCCTATGATCTGTTGGCCACACTTCTTCATCTCGACCCTTCCCATCGTGGCACTGCTTCCTCTGCTCTCCAAAGTGAATTCTTCAAATCTAGCCCATTAGCATGCCAACCTTCAGATTTACCAGTAATCTACAAAGATGAGGATGAACGCTTACGAACCAAGAGACGCAAAAGGCAAAGGGCTGTGAAGAAAAGGCAACTATCTCAAAGAAGTAAAAGTGATGTCAGTCAATCAGGAAAGAACCAAACTGAAGAACAACTTGGGAGGGATTTGAAATTGTCAAAAGAGGAGAAGAATGTGGAACAGAACAAAGAAGGTCAAGAAACGGGGAATAGTGCAACAAGCAGCACATCGTCGGGCTCAAGACTACTCATGACCGAAGGGAGCAATAGCATGAATGCATCTATATCCCCACTTTTTCTCCCAATGAGTGGGAGAAAATTATCCCCCAAGACCGATGGTCACCCGAATGCTCTCAAGAACATAAAGAACTATAGTACTCTCGTACAGGCCTCTATGATTGATATGATCCACCACAATAATGAAGGCGACGAATTTGCTCAGCTTCGGAGGTCCTTCTCAACGTTCGATTATCGACTTGATCCGGATAAGCTAGCAGATCTCTATGGATTACCTAAAAAGATTTAGTCTTGGTCTATCCTAGCACATACATGTTATTTTTATATCATCATTTAATTCTGTTTTGTCTCATGGTTGAACGAAATAATTTGACTAGAACTTTCTCAACCATTTAGTTAAATTCTTTTAATTAATAGCATTACACCACATGATTAAAATG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00933	59849	64952	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000933s00028073.1	PF00069.20	Pkinase	144	426	7.60E-71

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.360
SRR1783600	control	0.346
SRR1783602	moderate drought stress	3.333
SRR1811619	moderate drought stress	3.366

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	25.970
DRR006520	Root Summer glycyrrhizin high producing strain	26.064
DRR006521	Root Winter glycyrrhizin high producing strain	32.511
DRR006522	Root Winter glycyrrhizin high producing strain	32.186
DRR006523	Root Summer glycyrrhizin low producing strain	6.242
DRR006524	Root Summer glycyrrhizin low producing strain	6.036
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.040
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.040

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.050
SRR2868004	Drought Stress (root)	0.000
SRR2967015	Control (root)	0.067

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.000
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.570
SRR9715743	Root	0.474

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.031
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.008
SRR8749031	Uninduced	0.012
SRR8749032	Uninduced	0.004

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.139
SRR8400027	Control - Root	0.151