Gene detail information of Glyur000932s00035817 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G26090.1 | 8.00E-10 | NB-ARC domain-containing disease resistance protein |
| NR | XP_007134969.1 | 0 | hypothetical protein PHAVU_010G091100g [Phaseolus vulgaris] |
| Swissprot | tr|Q8LKZ8|RPS2_ARATH | 5.00E-10 | Disease resistance protein RPS2 |
| trEMBL | tr|V7AQS3|V7AQS3_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW06963.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00932 | 20187 | 47597 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.585 |
| SRR1783600 | control | 4.432 |
| SRR1783602 | moderate drought stress | 4.760 |
| SRR1811619 | moderate drought stress | 3.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.342 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.440 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.756 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.380 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.426 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.341 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.180 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.320 |
| SRR2868004 | Drought Stress (root) | 34.539 |
| SRR2967015 | Control (root) | 29.159 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.022 |
| SRR9715740 | Leaf | 1.343 |
| SRR9715741 | Leaf | 0.932 |
| SRR9715739 | Root | 0.322 |
| SRR9715742 | Root | 2.089 |
| SRR9715743 | Root | 2.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.246 |
| SRR8749028 | MeJA induced 9h | 3.065 |
| SRR8749029 | MeJA induced 9h | 2.175 |
| SRR8749030 | Uninduced | 2.665 |
| SRR8749031 | Uninduced | 6.325 |
| SRR8749032 | Uninduced | 2.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.210 |
| SRR8400027 | Control - Root | 7.297 |