Gene detail information of Glyur000930s00030236 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004493064.1 | 1.27E-25 | PREDICTED: uncharacterized protein LOC101503597 [Cicer arietinum] |
| trEMBL | tr|K7MXM2|K7MXM2_SOYBN | 7.00E-26 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G27440.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00930 | 70549 | 72957 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.620 |
| SRR1783600 | control | 1.762 |
| SRR1783602 | moderate drought stress | 1.144 |
| SRR1811619 | moderate drought stress | 1.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.554 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.641 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 35.715 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 36.076 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.902 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.292 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.241 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.308 |
| SRR2868004 | Drought Stress (root) | 0.203 |
| SRR2967015 | Control (root) | 0.547 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.641 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 2.295 |
| SRR9715739 | Root | 0.809 |
| SRR9715742 | Root | 0.922 |
| SRR9715743 | Root | 1.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.096 |
| SRR8400027 | Control - Root | 3.919 |