Gene detail information of Glyur000927s00024244 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G00910.1 | 3.00E-98 | Aluminium activated malate transporter family protein |
| NR | XP_007161574.1 | 0 | hypothetical protein PHAVU_001G081000g [Phaseolus vulgaris] |
| Swissprot | tr|O23086|ALMTA_ARATH | 5.00E-124 | Aluminum-activated malate transporter 10 |
| trEMBL | tr|V7CW15|V7CW15_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW33568.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00927 | 29721 | 32494 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000927s00024244.1 | PF11744.3 | ALMT | 49 | 280 | 7.60E-99 |
| Glyur000927s00024244.1 | PF11744.3 | ALMT | 281 | 411 | 9.80E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.177 |
| SRR1783600 | control | 0.170 |
| SRR1783602 | moderate drought stress | 0.112 |
| SRR1811619 | moderate drought stress | 0.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.160 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.018 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.081 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.082 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 74.268 |
| SRR2868004 | Drought Stress (root) | 114.201 |
| SRR2967015 | Control (root) | 82.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.003 |
| SRR9715741 | Leaf | 0.005 |
| SRR9715739 | Root | 0.035 |
| SRR9715742 | Root | 0.228 |
| SRR9715743 | Root | 0.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.773 |
| SRR8400027 | Control - Root | 1.755 |