Gene detail information of Glyur000927s00024239 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G05200.1 | 4.00E-08 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25 |
| NR | XP_007143181.1 | 1.82E-12 | hypothetical protein PHAVU_007G050300g [Phaseolus vulgaris] |
| Swissprot | tr|Q9C5S9|CRK6_ARATH | 4.00E-10 | Cysteine-rich receptor-like protein kinase 6 (Precursor) |
| trEMBL | tr|V7BC98|V7BC98_PHAVU | 7.00E-13 | Uncharacterized protein {ECO:0000313|EMBL:ESW15175.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00927 | 1692 | 5778 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.131 |
| SRR1811619 | moderate drought stress | 0.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.112 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.123 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.824 |
| SRR2868004 | Drought Stress (root) | 1.337 |
| SRR2967015 | Control (root) | 0.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.136 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.064 |
| SRR9715743 | Root | 0.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.442 |
| SRR8749028 | MeJA induced 9h | 3.085 |
| SRR8749029 | MeJA induced 9h | 2.554 |
| SRR8749030 | Uninduced | 4.415 |
| SRR8749031 | Uninduced | 9.709 |
| SRR8749032 | Uninduced | 5.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.349 |
| SRR8400027 | Control - Root | 0.172 |