Gene detail information of Glyur000926s00019335 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38070.1 | 5.00E-75 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_004485611.1 | 0 | PREDICTED: uncharacterized protein At4g38062-like [Cicer arietinum] |
| Swissprot | tr|P0CB23|Y4862_ARATH | 5.00E-88 | Uncharacterized protein At4g38062 |
| trEMBL | tr|Q2HVA4|Q2HVA4_MEDTR | 0 | Viral A-type inclusion protein, putative {ECO:0000313|EMBL:AES63521.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00926 | 98914 | 101682 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.656 |
| SRR1783600 | control | 0.668 |
| SRR1783602 | moderate drought stress | 0.360 |
| SRR1811619 | moderate drought stress | 0.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.626 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.580 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.040 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.609 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.629 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.168 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.326 |
| SRR2868004 | Drought Stress (root) | 3.011 |
| SRR2967015 | Control (root) | 4.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.252 |
| SRR9715740 | Leaf | 0.034 |
| SRR9715741 | Leaf | 0.311 |
| SRR9715739 | Root | 0.160 |
| SRR9715742 | Root | 0.313 |
| SRR9715743 | Root | 0.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.331 |
| SRR8749028 | MeJA induced 9h | 9.282 |
| SRR8749029 | MeJA induced 9h | 6.172 |
| SRR8749030 | Uninduced | 1.241 |
| SRR8749031 | Uninduced | 0.931 |
| SRR8749032 | Uninduced | 0.804 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.720 |
| SRR8400027 | Control - Root | 2.857 |