Gene detail information of Glyur000926s00019333 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33625.1 | 2.00E-63 | |
| NR | AEJ20973.1 | 3.25E-95 | unknown protein [Caragana jubata] |
| trEMBL | tr|F8SVN5|F8SVN5_9FABA | 1.00E-95 | Putative uncharacterized protein {ECO:0000313|EMBL:AEJ20973.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00926 | 92209 | 94973 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000926s00019333.1 | PF08507.5 | COPI_assoc | 47 | 162 | 1.50E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.911 |
| SRR1783600 | control | 16.517 |
| SRR1783602 | moderate drought stress | 9.653 |
| SRR1811619 | moderate drought stress | 9.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.464 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.854 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 68.420 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 67.321 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.979 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.988 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.093 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.944 |
| SRR2868004 | Drought Stress (root) | 13.113 |
| SRR2967015 | Control (root) | 14.951 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.487 |
| SRR9715740 | Leaf | 25.562 |
| SRR9715741 | Leaf | 21.819 |
| SRR9715739 | Root | 10.490 |
| SRR9715742 | Root | 15.384 |
| SRR9715743 | Root | 13.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.249 |
| SRR8749028 | MeJA induced 9h | 4.266 |
| SRR8749029 | MeJA induced 9h | 2.352 |
| SRR8749030 | Uninduced | 2.711 |
| SRR8749031 | Uninduced | 0.368 |
| SRR8749032 | Uninduced | 1.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.378 |
| SRR8400027 | Control - Root | 36.859 |