Gene detail information of Glyur000926s00019327 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G09570.1 | 2.00E-17 | Cox19-like CHCH family protein |
| NR | NP_001235122.1 | 2.59E-29 | uncharacterized protein LOC100305931 [Glycine max] |
| trEMBL | tr|C6SX80|C6SX80_SOYBN | 1.00E-29 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G32930.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00926 | 62543 | 64124 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.066 |
| SRR1783600 | control | 0.035 |
| SRR1783602 | moderate drought stress | 0.260 |
| SRR1811619 | moderate drought stress | 0.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.234 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.167 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.643 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.582 |
| SRR2868004 | Drought Stress (root) | 2.771 |
| SRR2967015 | Control (root) | 0.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.151 |
| SRR9715740 | Leaf | 0.426 |
| SRR9715741 | Leaf | 0.825 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 2.121 |
| SRR9715743 | Root | 1.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.504 |
| SRR8749028 | MeJA induced 9h | 11.462 |
| SRR8749029 | MeJA induced 9h | 6.476 |
| SRR8749030 | Uninduced | 1.879 |
| SRR8749031 | Uninduced | 4.762 |
| SRR8749032 | Uninduced | 3.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.242 |
| SRR8400027 | Control - Root | 0.110 |