Gene detail information of Glyur000926s00019325 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23970.1 | 1.00E-61 | Class I glutamine amidotransferase-like superfamily protein |
| NR | XP_004485616.1 | 4.03E-131 | PREDICTED: putative glutamine amidotransferase-like protein C13C5.04-like [Cicer arietinum] |
| COG | YP_166544.1 | 4.00E-32 | glutamine amidotransferase, class I [Ruegeria pomeroyi DSS-3] |
| trEMBL | tr|A2Q1P2|A2Q1P2_MEDTR | 2.00E-128 | Glutamine amidotransferase class-I {ECO:0000313|EMBL:ABN05859.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00926 | 56484 | 61981 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000926s00019325.1 | PF00117.23 | GATase | 40 | 212 | 3.70E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.515 |
| SRR1783600 | control | 1.493 |
| SRR1783602 | moderate drought stress | 9.185 |
| SRR1811619 | moderate drought stress | 8.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.770 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.464 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.172 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.245 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.420 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.280 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 164.011 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 164.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 90.759 |
| SRR2868004 | Drought Stress (root) | 76.534 |
| SRR2967015 | Control (root) | 122.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 129.951 |
| SRR9715740 | Leaf | 122.617 |
| SRR9715741 | Leaf | 88.562 |
| SRR9715739 | Root | 5.453 |
| SRR9715742 | Root | 15.118 |
| SRR9715743 | Root | 11.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.244 |
| SRR8749028 | MeJA induced 9h | 1.426 |
| SRR8749029 | MeJA induced 9h | 0.838 |
| SRR8749030 | Uninduced | 0.054 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.215 |
| SRR8400027 | Control - Root | 24.945 |