Gene detail information of Glyur000925s00020297 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25280.2 | 1.00E-36 | serine-rich protein-related |
| NR | XP_004498757.1 | 2.62E-82 | PREDICTED: vitellogenin-2-like [Cicer arietinum] |
| trEMBL | tr|G7JAF4|G7JAF4_MEDTR | 5.00E-74 | Uncharacterized protein {ECO:0000313|EMBL:AFK38729.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00925 | 37563 | 39367 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.661 |
| SRR1783600 | control | 14.941 |
| SRR1783602 | moderate drought stress | 18.359 |
| SRR1811619 | moderate drought stress | 18.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.729 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.175 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.760 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.712 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.556 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.209 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.932 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.746 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.588 |
| SRR2868004 | Drought Stress (root) | 13.528 |
| SRR2967015 | Control (root) | 15.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.284 |
| SRR9715740 | Leaf | 5.700 |
| SRR9715741 | Leaf | 10.079 |
| SRR9715739 | Root | 10.005 |
| SRR9715742 | Root | 12.397 |
| SRR9715743 | Root | 9.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 95.187 |
| SRR8749028 | MeJA induced 9h | 68.836 |
| SRR8749029 | MeJA induced 9h | 74.229 |
| SRR8749030 | Uninduced | 134.733 |
| SRR8749031 | Uninduced | 159.674 |
| SRR8749032 | Uninduced | 54.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.491 |
| SRR8400027 | Control - Root | 10.371 |