Gene detail information of Glyur000918s00025555 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G58375.1 | 2.00E-14 | Methyltransferase-related protein |
| NR | XP_003553225.1 | 6.59E-48 | PREDICTED: uncharacterized protein LOC100306619 [Glycine max] |
| trEMBL | tr|C6T071|C6T071_SOYBN | 2.00E-48 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G06160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00918 | 92385 | 93151 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 39.377 |
| SRR1783600 | control | 38.104 |
| SRR1783602 | moderate drought stress | 36.612 |
| SRR1811619 | moderate drought stress | 37.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 38.676 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 37.208 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.764 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.981 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 38.627 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 40.105 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.019 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 50.348 |
| SRR2868004 | Drought Stress (root) | 70.830 |
| SRR2967015 | Control (root) | 87.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.624 |
| SRR9715740 | Leaf | 26.856 |
| SRR9715741 | Leaf | 25.213 |
| SRR9715739 | Root | 25.796 |
| SRR9715742 | Root | 17.920 |
| SRR9715743 | Root | 15.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.102 |
| SRR8749028 | MeJA induced 9h | 43.654 |
| SRR8749029 | MeJA induced 9h | 21.573 |
| SRR8749030 | Uninduced | 41.222 |
| SRR8749031 | Uninduced | 32.313 |
| SRR8749032 | Uninduced | 33.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 52.922 |
| SRR8400027 | Control - Root | 52.976 |