Gene detail information of Glyur000918s00025538 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G56220.1 | 8.00E-22 | transcription regulators |
| NR | NP_001235431.1 | 1.38E-57 | uncharacterized protein LOC100305696 [Glycine max] |
| Swissprot | tr|O24303|TI110_PEA | 6.00E-29 | Protein TIC110, chloroplastic (Precursor) |
| trEMBL | tr|C6SW93|C6SW93_SOYBN | 5.00E-58 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G06270.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00918 | 6935 | 13521 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.790 |
| SRR1783600 | control | 7.899 |
| SRR1783602 | moderate drought stress | 8.755 |
| SRR1811619 | moderate drought stress | 8.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.629 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 36.513 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.175 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.079 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.971 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.222 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.655 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.524 |
| SRR2868004 | Drought Stress (root) | 0.835 |
| SRR2967015 | Control (root) | 1.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.776 |
| SRR9715740 | Leaf | 0.548 |
| SRR9715741 | Leaf | 2.888 |
| SRR9715739 | Root | 1.117 |
| SRR9715742 | Root | 15.185 |
| SRR9715743 | Root | 12.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.028 |
| SRR8749029 | MeJA induced 9h | 0.060 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.238 |
| SRR8400027 | Control - Root | 32.693 |