Gene detail information of Glyur000917s00030718 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G04865.1 | 2.00E-04 | Aminotransferase-like, plant mobile domain family protein |
| NR | XP_004497288.1 | 6.05E-12 | PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cicer arietinum] |
| trEMBL | tr|V7CPX9|V7CPX9_PHAVU | 3.00E-11 | Uncharacterized protein {ECO:0000313|EMBL:ESW31300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00917 | 98342 | 99152 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000917s00030718.1 | PF10536.4 | PMD | 24 | 171 | 3.30E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.204 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.204 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.179 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.057 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.068 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.148 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 96.399 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 92.320 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.033 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.450 |
| SRR9715740 | Leaf | 0.842 |
| SRR9715741 | Leaf | 0.863 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.104 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.058 |
| SRR8749031 | Uninduced | 0.171 |
| SRR8749032 | Uninduced | 0.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.018 |