Gene detail information of Glyur000916s00027864 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42950.1 | 6.00E-50 | GYF domain-containing protein |
| NR | XP_004499142.1 | 8.36E-103 | PREDICTED: uncharacterized protein LOC101507508 isoform X2 [Cicer arietinum] |
| trEMBL | tr|A0A072VPQ7|A0A072VPQ7_MEDTR | 2.00E-96 | GYF domain protein {ECO:0000313|EMBL:KEH40120.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00916 | 100985 | 105415 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.440 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.261 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.144 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.536 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.924 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.209 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.130 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.325 |
| SRR2868004 | Drought Stress (root) | 5.418 |
| SRR2967015 | Control (root) | 5.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.396 |
| SRR8749028 | MeJA induced 9h | 14.141 |
| SRR8749029 | MeJA induced 9h | 9.993 |
| SRR8749030 | Uninduced | 10.817 |
| SRR8749031 | Uninduced | 19.542 |
| SRR8749032 | Uninduced | 12.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.553 |
| SRR8400027 | Control - Root | 2.656 |