Gene detail information of Glyur000916s00027858 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75170.2 | 1.00E-87 | Sec14p-like phosphatidylinositol transfer family protein |
| NR | XP_004499146.1 | 3.10E-147 | PREDICTED: random slug protein 5-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|A0A072VE77|A0A072VE77_MEDTR | 2.00E-143 | Sec14p-like phosphatidylinositol transfer family protein {ECO:0000313|EMBL:KEH40127.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00916 | 63842 | 67484 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000916s00027858.1 | PF03765.10 | CRAL_TRIO_N | 48 | 94 | 2.20E-10 |
| Glyur000916s00027858.1 | PF00650.15 | CRAL_TRIO | 106 | 217 | 3.40E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.462 |
| SRR1783600 | control | 19.451 |
| SRR1783602 | moderate drought stress | 14.877 |
| SRR1811619 | moderate drought stress | 14.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.183 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.056 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.168 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.431 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.061 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.587 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 66.143 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 67.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 52.912 |
| SRR2868004 | Drought Stress (root) | 44.830 |
| SRR2967015 | Control (root) | 31.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 86.990 |
| SRR9715740 | Leaf | 142.089 |
| SRR9715741 | Leaf | 113.964 |
| SRR9715739 | Root | 3.111 |
| SRR9715742 | Root | 16.667 |
| SRR9715743 | Root | 13.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.919 |
| SRR8749028 | MeJA induced 9h | 26.887 |
| SRR8749029 | MeJA induced 9h | 45.086 |
| SRR8749030 | Uninduced | 5.545 |
| SRR8749031 | Uninduced | 2.837 |
| SRR8749032 | Uninduced | 5.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 48.482 |
| SRR8400027 | Control - Root | 36.101 |