Gene detail information of Glyur000916s00027857 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75180.3 | 9.00E-72 | Erythronate-4-phosphate dehydrogenase family protein |
| NR | KHN12714.1 | 1.82E-156 | Hypothetical protein glysoja_008677 [Glycine soja] |
| Swissprot | tr|Q8GUH2|Y1015_ARATH | 1.00E-61 | Uncharacterized protein At1g01500 |
| trEMBL | tr|K7MNU9|K7MNU9_SOYBN | 2.00E-156 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G36860.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00916 | 59151 | 62887 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.161 |
| SRR1783600 | control | 0.187 |
| SRR1783602 | moderate drought stress | 0.897 |
| SRR1811619 | moderate drought stress | 0.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.864 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.876 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.213 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.152 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.146 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.868 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.946 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.573 |
| SRR2868004 | Drought Stress (root) | 6.179 |
| SRR2967015 | Control (root) | 3.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 48.505 |
| SRR9715740 | Leaf | 50.238 |
| SRR9715741 | Leaf | 64.175 |
| SRR9715739 | Root | 1.943 |
| SRR9715742 | Root | 2.661 |
| SRR9715743 | Root | 2.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 97.051 |
| SRR8749028 | MeJA induced 9h | 86.003 |
| SRR8749029 | MeJA induced 9h | 63.794 |
| SRR8749030 | Uninduced | 121.530 |
| SRR8749031 | Uninduced | 88.111 |
| SRR8749032 | Uninduced | 57.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.653 |
| SRR8400027 | Control - Root | 3.762 |