Gene detail information of Glyur000916s00027855 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007160756.1 | 5.06E-26 | hypothetical protein PHAVU_001G014600g [Phaseolus vulgaris] |
| trEMBL | tr|V7CU08|V7CU08_PHAVU | 2.00E-26 | Uncharacterized protein {ECO:0000313|EMBL:ESW32750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00916 | 49610 | 50014 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000916s00027855.1 | PF02178.14 | AT_hook | 42 | 52 | 0.0054 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.197 |
| SRR1783600 | control | 1.921 |
| SRR1783602 | moderate drought stress | 0.547 |
| SRR1811619 | moderate drought stress | 0.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.679 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.163 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.248 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.682 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.536 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.513 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.775 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.541 |
| SRR2868004 | Drought Stress (root) | 11.004 |
| SRR2967015 | Control (root) | 16.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.398 |
| SRR9715740 | Leaf | 4.044 |
| SRR9715741 | Leaf | 5.089 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.047 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 131.443 |
| SRR8749028 | MeJA induced 9h | 70.787 |
| SRR8749029 | MeJA induced 9h | 98.954 |
| SRR8749030 | Uninduced | 241.377 |
| SRR8749031 | Uninduced | 176.043 |
| SRR8749032 | Uninduced | 123.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.749 |
| SRR8400027 | Control - Root | 1.775 |