Gene detail

Gene detail information of Glyur000914s00025722

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G45650.1	0	subtilase family protein
NR	XP_003541678.1	0	PREDICTED: subtilisin-like protease-like isoform X1 [Glycine max]
COG	YP_004097803.1	2.00E-105	peptidase S8 and S53 subtilisin kexin sedolisin [Intrasporangium calvum DSM 43043]
Swissprot	tr\|Q9ZSP5\|AIR3_ARATH	0	Subtilisin-like protease SBT5.3 (Precursor)
trEMBL	tr\|I1M1L8\|I1M1L8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G29470.1}

Sequence

Transcript Sequence

>Glyur000914s00025722.1
GCGTTTGTCTACAAATTAATGGCAACAAAGAACATCATTTCTGCAACATGTGTCCTNCTCCTCCTCCTCCTCCTCTTCCTTCTTCCCTTGGCCTCATGCACCGAAAAGAAGCAGATTTATGTAGTGGAGTTTGGAGAGCACACTAGTGGAGACAGAACACTAGTGCATGAAATAGAGAATACCCATCACTCTTATTTGCTTTTGGTGAAAGAAACNGAGGAAGAAGCCAGAGCTTCCCTTCTTTATAGTTACAAACACAGTATCAATGCCTTTGCAGCATTGCTTACCCCAAAAGAAGCCAATAAGCTCTCAGAAATGGAGGGAGTGGTCTCTGTGCATAAGAGCCAGCCAAGGATCTACTCTTTGCACACCACAAGGTCATGGAAGTTCGTGGGGTTAGATGGGCCATGGGAAGAAGAATATTCCAATCAGACAGATAGAGACTTGTTAACCAGAGCAAAATATGGGGAAGATATTATAGTAGGAATGATTGATAGTGGGGTGTGGCCAGACTCAAAGAGTTTCAGTGATGAAGGGATGGGGCCAGTTCCACAAAATTGGAAAGGAGTGTGCCAAAATGGAACTGCTTTCACTTCATCTCAATGTAATAGAAAGATAATTGGAGCTCGGTACTACTTGCGTGGTTATGAAAGTGCATTTGGGCCTCTAAACGAAGAGGAGGATTACAAATCAGCACGTGACAAAGACGGACACGGGACTCACACATCATCCATAGTGGGAGGGCGTGCAGTTCCCAAAGCCTCAGCCATTGGGGGCTTCGCCAGTGGCACCGCCTCAGGGGGTGCCCCTTTAGCTCGACTTGCCATATACAAAGCATGTTGGCCATTNAAAGGACAATCAAAACACGAGGGCAACATTTGCACTGACATTGATCTNCTCAAGGCTATTGATGATGCCATTGGTGATGGTGTCCATGTTTTGAGTATTTCCATTGGCTTCAAAATGCCTATCCCTTATGGCGATGATGTCATTGCTAAGAGCGCGTTACACGCTGTGAGGAACAACATCGTCGTGGTTTGTAGTGCTGGGAACATGGGTCCTTTACCTCACAGCTTGTCCAACCCTGCTCCATGGATCATCACTGTTGNTGCTAGTACTGTCGACCGCTCCTTTCTTTCTCCAATTAAGCTAAGCAATGCCACAAATATTGAGGGGCGATCAATTACTCCGCTCCACATGGAAAACTGTTTGCACCCATTGGTTCTCGCNAGAGATGTTGAACATCCAGGCGTGCCGACTGCAGATTCTGGGTATTGCCTAGACAATACCCTTCAACCTGACAAGGTCCAGGGGAAGATAGTTCTGTGCATGAGAGGGAAAGGTGAAAGATTGAAAAAAGGGTTGGAAGTACAAAGGGCTGGTGGTGTTGGTTTTATCCTTGGNAACAATAAGATGTATGGAAATGATGTACCATCTGATCCCCATTTCATTCCAGCCACAGGGGTGTCCTTTGAGAATGCCTTAAAACTTATACACTATGTCCAATCTTCCCCTAATCCAATGGCACAAATTTTGCCTGGAAGAACAGTGTTAAAAACCAAACCAGCACCCTCCATGGCCTCTTTCTCTAGCAGAGGTCCAAATATAATTGACCCTAACATACTAAAGCCTGACATTACAGCTCCTGGAGTAGACATATTGGCTGCATGGACCGCTAAAGATGGCCCTACAAGAATGACATTTCATGATAAACGAGTTGTTAAGTACAACATCTTTTCTGGAACCTCAATGTCTTGCCCTCATGTTGCTGCAGCAGCAGTTCTTCTCAAAGCCATTCACCCTACTTGGAGCAGTGCTGCTATAAGGTCTGCCCTCATGACTACAGGCAATCCAATGACTGATGAAACTGGAAATGCTGCGACTCCTTTTGCAATGGGTTCTGGCCACTTCAACCCCAAAAGAGCAGCAGATCCTGGACTTGTTTACGATGCATCCTACATGGACTACGTTCTTTACACCTGTAGCCTTGGAGTAACTAAGAACTTAAGCATTGCATATAACTGTCCTAAATCGTTTCTTGAACCAAATGATCTCAACTATCCTTCCATACAAATCAATAGACTCAATTACACTAGGACTATAAAGAGGACAGTCACCAATGTTGGTAGGAGCAAGAGTGTTTACAAGTTTAATGCCATGCCACCAAAGGAATACTTCATCACAGCCACTCCCAACATTCTGAAGTTTAATCGTGTTGGGCAAAAAATGAACTTTATAATTACAGTGACANCAAACAGAGATCAGATACCAACCAAACATGACCCTTATGAGTACCATTTTGGATGGTATGCTTGGACTGACAAATATCACATTGTAAGAAGCCCAGTGGCAGTGTCATTTCCATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00914	96059	101740	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004252 serine-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000914s00025722.1	PF05922.11	Inhibitor_I9	34	111	9.40E-14
Glyur000914s00025722.1	PF00082.17	Peptidase_S8	155	636	3.60E-35
Glyur000914s00025722.1	PF02225.17	PA	415	494	9.20E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.385
SRR1783600	control	0.374
SRR1783602	moderate drought stress	0.333
SRR1811619	moderate drought stress	0.361

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.161
DRR006520	Root Summer glycyrrhizin high producing strain	1.167
DRR006521	Root Winter glycyrrhizin high producing strain	0.138
DRR006522	Root Winter glycyrrhizin high producing strain	0.132
DRR006523	Root Summer glycyrrhizin low producing strain	0.913
DRR006524	Root Summer glycyrrhizin low producing strain	0.925
DRR006525	Leaf Summer glycyrrhizin high producing strain	83.726
DRR006526	Leaf Summer glycyrrhizin high producing strain	83.656

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	3.309
SRR2868004	Drought Stress (root)	2.071
SRR2967015	Control (root)	3.729

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.331
SRR9715740	Leaf	4.871
SRR9715741	Leaf	1.573
SRR9715739	Root	0.012
SRR9715742	Root	0.915
SRR9715743	Root	0.651

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.124
SRR8749028	MeJA induced 9h	0.020
SRR8749029	MeJA induced 9h	0.003
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.046

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.332
SRR8400027	Control - Root	3.221