Gene detail

Gene detail information of Glyur000914s00025718

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G29670.1	4.00E-85	GDSL-like Lipase/Acylhydrolase superfamily protein
NR	XP_003526254.1	1.32E-170	PREDICTED: GDSL esterase/lipase At1g29670-like [Glycine max]
COG	YP_007082272.1	1.00E-10	phospholipase/lecithinase/hemolysin [Pleurocapsa sp. PCC 7327]
Swissprot	tr\|Q9C7N4\|GDL15_ARATH	2.00E-103	GDSL esterase/lipase At1g29670 (Precursor)
trEMBL	tr\|I1KEX0\|I1KEX0_SOYBN	1.00E-166	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G44100.1}

Sequence

Transcript Sequence

>Glyur000914s00025718.1
GGGCAGTGGTGGTGGTGGTGGTTCTGGTGGCAGGTTTGTGGAGTAGTGGGGTTAGAGGTGCACCACAAGTACCTTGTTACTTTATCTTTGGGGACTCTTTGGTGGATAATGGCAACAACAACCAACTCTCTTCTTTGGCCAAAGCTAATTACTTCCCTTATGGGATTGACTTCCCTCGAGGCCCAACTGGAAGCTGAGCTTTTGGGGTTCGACGGTTACATACCTCCCTATGCAACAGCAAGAGGCCAAGACATACTCAANGGAGTCAATTATGCTTCAGCAGCTGCAGGAATTAGAGAGGAAACAGGACAGCAACTGGGAGGGAGAATTAGTTTTAGAGGGCAGGTGCAGAATTACCAAAGGACGGTGTCCCAGGTGGTGAATTNACTTGGAGATGAGAACACTGCTGCAAATTATCTTAGCAAGTGCATTTACTCAATTGGATTGGGTAGCAATGATTACCTTAACAACTACTTCATGCCTCAAATCTATTCCAGCAGCAGGCAGTACACACCACAGCAATATGCTAATGTCCTTATTCAAGCATATGCTCAACAACTCAGGATTTTGTACAACTATGGAGCAAGAAAAATGGTGTTATTTGGGGTTGGTCAAGTAGGTTGCAGCCCTAATGAATTGGCCCAAAATAGCCCAGATGGAAGAACATGNGTGGCAAGAATCAATTCTGCAAACCAAATTTTCAACAACGGGTTGAGATCTCTTGTTGATCAACTCAACAACCAGCTCCCGGATGCAAGATTCATCTATGTAAACGTTTATGGTATCTTTCAAGATATCATAAGCAACCCATCATCCTATGAGTCACAAATGCTGGGTGCTGTGGTGTGGGAAGGAACAATGGTCAAATTACATGTCTGCCCCTGCAAGCCCCATGTAGGAACAGGAGGGAGTTCTTGTTTTGGGATGCATTTCATCCAACAGAGGCTGGGAATAGTAGAGATGGCTTTTGAGACTAAAACGTGGTTGGTTCCACCTCTGCTTATTCTATTGGTTGCAAGCTGCATGCAACAATATTGTGTCTATGGGGAATCTCAAGTGCCTTGCCTTTTTATTTTTGGGGACTCTTTGTCTGATAATGGAAACAATAACAACCTTACTACATCTTCAAAATCTAATTACAAGCCATATGGCATTGACTTCCCAACTGGCCCAACCGGAAGATTTACCAATGGACCAACTGCAATTGACATAATTGCCCAACTGTTAGGATTTGAGAATTTCATCCCACCCTTTGCAAACGCTAGTGGCTCAGATATATTGAAAGGTGTCAATTATGCATCTGGTTCAGCTGGAATTCGCGCTGAGAGTGGCACAAATTTGGGTACTAATATCAACTTGACATCACAGTTAGCAAATCACAGAACCATAGTTTCTCAAATTTCTATGAAGCTTGGAGGTTCTCGCCAAGCTATAAAATATCTTAAGAAGTGCTTGTATTATGTGAACATAGGCACCAATGATTACATAAACAATTATTTCCTTCCGCAATTCTTCCAAACAAGTCGCCTCTATAGCCCTGAGCAGTATGCTCAAGTTCTTACTAACCAGTTATCTAGATTTATACAGGCTTTGCACGATGATGGGGCAAGGAAACACGTGCTAGTTGGGCTGGGCCTTTTCGGTTGTACTCCGAATGCCATCTCTACTCATAGGACAAATGGGTCATGTGTTGAAGAGGAGAATGCTAGTGCATTCATTTTTAATGACAAGCTTAAATCTCTAGTGGATCAATTCAATGCCCGATTCTCTAATGACTCCAAATATATCTTTATAAATAGTACTGCCTTAACCTTTGACAATTCANCTGGCTTTACAGTNTCAAATGCTTCTTGTTGCCCAATGGATGCTAATGGGTTTTGTATTCGTGATCAAATGCCNTGTCAGAATAGAAATGAGTACGTGTTTTGGGATGGCGTCCACCCCACATCGTCTGCAAATCAACTCACGGCAANAACTTCTTATAATGGTTCTAATCCAGCTTTCACTTACCCAGTGGATATCAAACACCTTGTTCAGGTACTAATATGTAATATCAACTTGGGATCACAGATAGCAAATCACAGAGCCATAATTTCTCAAATTTCTATCAAGCTTGGAGGTTTTCGCCAAGCTGTACAATATCTTAAGAAGTGTTTGTATTATGTGAATATAGGCAACAATGATTACATAAATAATTATTTTCTTCCCCAATTCTACCATACAAGTCGCCTCTATAGCCCTGAGCGGCTTTACAATTTACATGAAGTTGGGGCAAGGAAACACGTGCTGGTTGGGCTGGGCCTTTTAGGTTGTACACCGTATTCCATTTCTACTCATAGGACAAATGGATCATGTGTGGAAGAGGAGAATGCTGCGAACAGGATTGGGTTATGTATTCGTGATCAAATGCCATGCCAAAATAGAAATGAGTATGTGTTTTGGGACGGAGTCCATCCCACATCGACCACAAACCGACTCACGGCAATAGCTTATTATAATGGTTCTAATCCAGCTTTCACTTACCCAGTGGACATCAAACACCTTGTTCAAGAGATGGCTTGGGAGACAAAGACATGGTTGGTGATGCCTCTATTCTTCTTGGCTGCAAACTACATGCAACATTGTGTCGTTGGGGAACCTCAAGTGCCTTGCTTGTTTATCTTTGGGGACTCTTTGTCTGATAGTGGAAACAACAACCAGCTTCCAACCTCTGCAAAATCTAATTACAATCCTTATGGAATCGACTTCCAAATAGGCCCAACTGGAAGATTTACCAATGGCCGAACTGAAATTGACATAATTACTCAACTTCTNGGATTTGAGAATTTCATTCCACCATTTGCAAACATTAATGGTTCAGATGTACTTAAAGGTGTGAACTATGCATCTGGGGGAGCTGGAATTCGTAATGAGACCAGCATGAATACGTTCTACCCAACAAGCCACATTTATAGCCCTGAGCAGTATGCAGAAGCTCTAATTGAAGAGTTATCTTTGAATTTACTGGCTCTACATGAGGTTGGAGCAAGAAAATATGTGTTGGTTGGGTTGGGCCTTTTGGGCTGCACTCCAAATGCCATCCTTACTCACAGGACAAATGGGTCTTGCGTTGAAGAGGAGAATGCCCCTGTATTCATTTTCAATGACAAGCTTAAATCTCTAGTGGATCTTTTCAATAACAAGTTCAAAGCTGATTCCAAATTCATCTTTATAAACAGTACATCACAGGCCCTTGATAATTCACAAGGTTTTTTGGTTTCAAATGCTGCTTGCTGCCCATCAGGGTTGCTTGGAGGGTGTATTCCTGATCAAAGGCCATGTGATAATAGGAGTGAGTATGTGTTTTGGGATGAATTCCATCCCACTGAGGCTTGGAACCTATTCCCTGCACTAACGTCTTATGATGCTTCTTCTAATCCATCCTTCACTTATCCAATGGATATTAAGCACCTTGTTGACCAAGAATTTAAGATGGAATTGGAGCTCAAAAATGAGATCACATCACAGCTCAGTGCCCCTGAATAATTAGTTCAAGNTCTCATCCAGTCATTCATATGGAAATAAATAAGTACTTGCATTGAATATATCATTTTATTAAATGTTGT

Protein Sequence

>Glyur000914s00025718.1
GQWWWWWFWWQVCGVVGLEVHHKYLVTLSLGTLWWIMATTTNSLLWPKLITSLMGLTSLEAQLEAELLGFDGYIPPYATARGQDILXGVNYASAAAGIREETGQQLGGRISFRGQVQNYQRTVSQVVNXLGDENTAANYLSKCIYSIGLGSNDYLNNYFMPQIYSSSRQYTPQQYANVLIQAYAQQLRILYNYGARKMVLFGVGQVGCSPNELAQNSPDGRTXVARINSANQIFNNGLRSLVDQLNNQLPDARFIYVNVYGIFQDIISNPSSYESQMLGAVVWEGTMVKLHVCPCKPHVGTGGSSCFGMHFIQQRLGIVEMAFETKTWLVPPLLILLVASCMQQYCVYGESQVPCLFIFGDSLSDNGNNNNLTTSSKSNYKPYGIDFPTGPTGRFTNGPTAIDIIAQLLGFENFIPPFANASGSDILKGVNYASGSAGIRAESGTNLGTNINLTSQLANHRTIVSQISMKLGGSRQAIKYLKKCLYYVNIGTNDYINNYFLPQFFQTSRLYSPEQYAQVLTNQLSRFIQALHDDGARKHVLVGLGLFGCTPNAISTHRTNGSCVEEENASAFIFNDKLKSLVDQFNARFSNDSKYIFINSTALTFDNSXGFTVSNASCCPMDANGFCIRDQMPCQNRNEYVFWDGVHPTSSANQLTAXTSYNGSNPAFTYPVDIKHLVQVLICNINLGSQIANHRAIISQISIKLGGFRQAVQYLKKCLYYVNIGNNDYINNYFLPQFYHTSRLYSPERLYNLHEVGARKHVLVGLGLLGCTPYSISTHRTNGSCVEEENAANRIGLCIRDQMPCQNRNEYVFWDGVHPTSTTNRLTAIAYYNGSNPAFTYPVDIKHLVQEMAWETKTWLVMPLFFLAANYMQHCVVGEPQVPCLFIFGDSLSDSGNNNQLPTSAKSNYNPYGIDFQIGPTGRFTNGRTEIDIITQLLGFENFIPPFANINGSDVLKGVNYASGGAGIRNETSMNTFYPTSHIYSPEQYAEALIEELSLNLLALHEVGARKYVLVGLGLLGCTPNAILTHRTNGSCVEEENAPVFIFNDKLKSLVDLFNNKFKADSKFIFINSTSQALDNSQGFLVSNAACCPSGLLGGCIPDQRPCDNRSEYVFWDEFHPTEAWNLFPALTSYDASSNPSFTYPMDIKHLVDQEFKMELELKNEITSQLSAPE

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00914	67863	84962	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016788 hydrolase activity, acting on ester bonds

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000914s00025718.1	PF00657.17	Lipase_GDSL	113	272	6.50E-21
Glyur000914s00025718.1	PF00657.17	Lipase_GDSL	356	657	1.70E-31
Glyur000914s00025718.1	PF00657.17	Lipase_GDSL	706	828	1.30E-05
Glyur000914s00025718.1	PF00657.17	Lipase_GDSL	885	1124	2.70E-19

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.671
SRR1783600	control	1.692
SRR1783602	moderate drought stress	2.548
SRR1811619	moderate drought stress	2.638

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.491
DRR006520	Root Summer glycyrrhizin high producing strain	0.470
DRR006521	Root Winter glycyrrhizin high producing strain	0.614
DRR006522	Root Winter glycyrrhizin high producing strain	0.641
DRR006523	Root Summer glycyrrhizin low producing strain	1.966
DRR006524	Root Summer glycyrrhizin low producing strain	2.165
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.389
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.590

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.767
SRR2868004	Drought Stress (root)	2.493
SRR2967015	Control (root)	1.521

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	16.212
SRR9715740	Leaf	13.383
SRR9715741	Leaf	7.921
SRR9715739	Root	0.311
SRR9715742	Root	1.319
SRR9715743	Root	1.194

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.148
SRR8749028	MeJA induced 9h	4.324
SRR8749029	MeJA induced 9h	3.325
SRR8749030	Uninduced	6.165
SRR8749031	Uninduced	2.372
SRR8749032	Uninduced	1.685

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.367
SRR8400027	Control - Root	2.677