Gene detail information of Glyur000913s00026125 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13660.1 | 2.00E-87 | |
| NR | XP_003552682.1 | 0 | PREDICTED: uncharacterized protein LOC100782217 [Glycine max] |
| trEMBL | tr|I1N535|I1N535_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G52420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00913 | 19310 | 24202 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.159 |
| SRR1783600 | control | 25.566 |
| SRR1783602 | moderate drought stress | 30.418 |
| SRR1811619 | moderate drought stress | 29.804 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.493 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.204 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.461 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.034 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.849 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 35.432 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.089 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.340 |
| SRR2868004 | Drought Stress (root) | 27.657 |
| SRR2967015 | Control (root) | 24.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.841 |
| SRR9715740 | Leaf | 13.328 |
| SRR9715741 | Leaf | 16.425 |
| SRR9715739 | Root | 13.750 |
| SRR9715742 | Root | 23.626 |
| SRR9715743 | Root | 20.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 100.879 |
| SRR8749028 | MeJA induced 9h | 25.986 |
| SRR8749029 | MeJA induced 9h | 55.262 |
| SRR8749030 | Uninduced | 8.162 |
| SRR8749031 | Uninduced | 23.597 |
| SRR8749032 | Uninduced | 21.086 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.042 |
| SRR8400027 | Control - Root | 26.965 |