Gene detail information of Glyur000911s00029416 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31330.1 | 4.00E-97 | Protein of unknown function, DUF599 |
| NR | XP_004498551.1 | 3.28E-153 | PREDICTED: uncharacterized protein LOC101505025 [Cicer arietinum] |
| COG | YP_002605130.1 | 3.00E-34 | hypothetical protein HRM2_39080 [Desulfobacterium autotrophicum HRM2] |
| trEMBL | tr|B7FKT7|B7FKT7_MEDTR | 1.00E-150 | Uncharacterized protein {ECO:0000313|EMBL:AFK47953.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00911 | 95623 | 97817 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000911s00029416.1 | PF04654.7 | DUF599 | 11 | 217 | 3.60E-69 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.066 |
| SRR1783600 | control | 5.067 |
| SRR1783602 | moderate drought stress | 6.504 |
| SRR1811619 | moderate drought stress | 6.527 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.902 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.584 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.224 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.194 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.690 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.701 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.243 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 53.775 |
| SRR2868004 | Drought Stress (root) | 67.539 |
| SRR2967015 | Control (root) | 41.688 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.016 |
| SRR9715740 | Leaf | 8.389 |
| SRR9715741 | Leaf | 9.344 |
| SRR9715739 | Root | 7.066 |
| SRR9715742 | Root | 18.835 |
| SRR9715743 | Root | 16.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.669 |
| SRR8749028 | MeJA induced 9h | 2.016 |
| SRR8749029 | MeJA induced 9h | 1.974 |
| SRR8749030 | Uninduced | 0.069 |
| SRR8749031 | Uninduced | 0.246 |
| SRR8749032 | Uninduced | 1.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.808 |
| SRR8400027 | Control - Root | 6.096 |