Gene detail

Gene detail information of Glyur000911s00029414

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G24800.1	7.00E-12	basic leucine zipper 9
NR	XP_004498549.1	5.34E-98	PREDICTED: basic leucine zipper 9-like [Cicer arietinum]
Swissprot	tr\|Q9FUD3\|BZIP9_ARATH	3.00E-24	Basic leucine zipper 9
trEMBL	tr\|G7I545\|G7I545_MEDTR	4.00E-98	BZIP transcription factor {ECO:0000313\|EMBL:AES58846.1}

Sequence

Transcript Sequence

>Glyur000911s00029414.1
CGTATTATGTCGCGCGAACTCTCCTATTTATACCCATGAAGCTGCTTCTCGTACTCCCTTTTCTTCTCCTTTTCTCTCTCCTCTCTTTCTCTCTCTGCGGTGGCTAAATGGAATCCAAGTGGGGCGGAGTTCTGGCTGCGTCGTCCCCATCGGTTTTCTCCGGCTTCGACGACCTCAAGTGGATCGATCAAGAACTCTTCACGAAGCGGCCGGTGGCTGGAGGAGTCAAAACAGCCAACGGATCGGCGAACGACGACGTGAAACCNTGTAAGGTTGAACAATTCACCGGCGGCGGAGGCGTTTGCTCCTGTGAACTCACCGGCGCCGCCGCTTTCCAAAACCTGGATGCGGTAACTGCATTTTCGACTTGTGGTGGGGCAACAAGTAATATTACTACCCTTGTCCACTCACCCCNAAACCTCAGTACTCCCAAGCATTCCACCATCTCTGCAACTATTGATTCTCAATCATCTATTTGTGGTACAGTTAGCAGCCCGGTGTCTGCTAATAAACCAAGTACCGGTAGAGACAATAATAATAATAATAATAATCAAGCCAAAGGAGGAGTCGCTATAACANGTGGTGGTTCATCACGTGATCCATCTGATGAGGATGATGAAGCTGGTCCTTGTGAACAGAGCACCAACCCTATTGACATGAAGCGCCTTAGAAGGAAGGTTTCTAATCGTGAGTCTGCCAGGAGGTCCAGAAGAAGAAAACAAGCGCATTTGGCCGACCTGGAGTTGCAGGTGAAGTTAGCAGAGGATATGGTTNCTAGGGGATCTATCACCACTTTCAATAACAACCAGCTTCAGCTTCAAAATCAGAGTCAATTGAGCACTACTACCCCAATAGGACCACAGGTCAACACGAGCATGGCACATGTGTCGCCCACCATCACAGTACATGGGAATAATGATCATCATGCTTCATATGGTGGTATCACAGTTAATCATGGACAGAATTCATCAGTACTTGGGAGTGCAGATTTNGAAATAACTTGCAGCAATTTCAACAATAGTGATGCTGTGAGCTCTTTGACTAGCATATATGGCCGTAACAGATTTTAATTTGCTCCATCACCACACCATATATGCATATATATATATATATAGCTAGTGTCCAGTTAGATATATCCTAGTTTATATATGTATGCC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00911	76662	81439	-

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000911s00029414.1	PF00170.16	bZIP_1	184	217	3.60E-09
Glyur000911s00029414.1	PF12498.3	bZIP_C	215	286	2.80E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	47.684
SRR1783600	control	49.151
SRR1783602	moderate drought stress	33.728
SRR1811619	moderate drought stress	35.063

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	24.909
DRR006520	Root Summer glycyrrhizin high producing strain	25.035
DRR006521	Root Winter glycyrrhizin high producing strain	1.711
DRR006522	Root Winter glycyrrhizin high producing strain	1.509
DRR006523	Root Summer glycyrrhizin low producing strain	71.293
DRR006524	Root Summer glycyrrhizin low producing strain	70.721
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.846
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.834

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	62.606
SRR2868004	Drought Stress (root)	74.453
SRR2967015	Control (root)	75.622

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	12.054
SRR9715740	Leaf	9.298
SRR9715741	Leaf	15.163
SRR9715739	Root	30.457
SRR9715742	Root	57.527
SRR9715743	Root	49.953

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.749
SRR8749028	MeJA induced 9h	0.451
SRR8749029	MeJA induced 9h	0.701
SRR8749030	Uninduced	1.686
SRR8749031	Uninduced	1.522
SRR8749032	Uninduced	3.424

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	82.144
SRR8400027	Control - Root	50.463