Gene detail information of Glyur000911s00029404 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11470.1 | 2.00E-47 | bromo-adjacent homology (BAH) domain-containing protein |
| NR | XP_006581418.1 | 9.01E-82 | PREDICTED: uncharacterized protein LOC100783899 isoform X3 [Glycine max] |
| trEMBL | tr|K7KTT4|K7KTT4_SOYBN | 6.00E-81 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G08530.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00911 | 13553 | 16028 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000911s00029404.1 | PF01426.13 | BAH | 80 | 201 | 1.70E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.772 |
| SRR1783600 | control | 23.676 |
| SRR1783602 | moderate drought stress | 32.903 |
| SRR1811619 | moderate drought stress | 33.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 39.330 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 38.982 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 53.933 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 52.879 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.424 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 33.883 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.739 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.542 |
| SRR2868004 | Drought Stress (root) | 39.890 |
| SRR2967015 | Control (root) | 36.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 41.513 |
| SRR9715740 | Leaf | 49.027 |
| SRR9715741 | Leaf | 37.966 |
| SRR9715739 | Root | 22.840 |
| SRR9715742 | Root | 39.076 |
| SRR9715743 | Root | 33.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.361 |
| SRR8749028 | MeJA induced 9h | 27.199 |
| SRR8749029 | MeJA induced 9h | 27.569 |
| SRR8749030 | Uninduced | 4.889 |
| SRR8749031 | Uninduced | 2.551 |
| SRR8749032 | Uninduced | 5.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 79.287 |
| SRR8400027 | Control - Root | 70.585 |