Gene detail information of Glyur000910s00020579 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G47278.2 | 2.00E-20 | |
| NR | XP_007158865.1 | 1.79E-37 | hypothetical protein PHAVU_002G188200g [Phaseolus vulgaris] |
| trEMBL | tr|V7CL54|V7CL54_PHAVU | 7.00E-38 | Uncharacterized protein {ECO:0000313|EMBL:ESW30859.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00910 | 100989 | 101655 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.622 |
| SRR1783600 | control | 0.515 |
| SRR1783602 | moderate drought stress | 1.277 |
| SRR1811619 | moderate drought stress | 1.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.756 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.664 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.294 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.063 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.864 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.353 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.056 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.636 |
| SRR2868004 | Drought Stress (root) | 1.707 |
| SRR2967015 | Control (root) | 1.695 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.072 |
| SRR9715740 | Leaf | 0.293 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.706 |
| SRR9715742 | Root | 0.713 |
| SRR9715743 | Root | 0.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.693 |
| SRR8749028 | MeJA induced 9h | 0.417 |
| SRR8749029 | MeJA induced 9h | 0.166 |
| SRR8749030 | Uninduced | 0.103 |
| SRR8749031 | Uninduced | 0.062 |
| SRR8749032 | Uninduced | 0.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.714 |
| SRR8400027 | Control - Root | 3.696 |