Gene detail

Gene detail information of Glyur000910s00020577

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G57330.1	1.00E-125	Galactose mutarotase-like superfamily protein
NR	XP_003529490.1	0	PREDICTED: putative glucose-6-phosphate 1-epimerase-like [Glycine max]
COG	YP_002355684.1	2.00E-61	aldose 1-epimerase [Thauera sp. MZ1T]
Swissprot	tr\|Q40784\|AAPC_CENCI	2.00E-167	Putative glucose-6-phosphate 1-epimerase
trEMBL	tr\|K7KYT6\|K7KYT6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G00510.2}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00910	85347	88605	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01792	E5.1.3.15	EC:5.1.3.15	Glycolysis / Gluconeogenesis	map00010

Gene Ontology

biological_process
GO:0005975 carbohydrate metabolic process

molecular_function

GO:0003824 catalytic activity

GO:0016853 isomerase activity

GO:0030246 carbohydrate binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000910s00020577.1	PF01263.15	Aldose_epim	20	292	2.10E-65

Expression pattern

SRA Experiment	Description	TPM
SRR1783599	control	7.202
SRR1783600	control	7.317
SRR1783602	moderate drought stress	7.465
SRR1811619	moderate drought stress	7.507

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.496
DRR006520	Root Summer glycyrrhizin high producing strain	7.296
DRR006521	Root Winter glycyrrhizin high producing strain	4.108
DRR006522	Root Winter glycyrrhizin high producing strain	3.673
DRR006523	Root Summer glycyrrhizin low producing strain	3.073
DRR006524	Root Summer glycyrrhizin low producing strain	2.913
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.334
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.243

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.506
SRR2868004	Drought Stress (root)	6.732
SRR2967015	Control (root)	5.409

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.071
SRR9715740	Leaf	0.332
SRR9715741	Leaf	0.195
SRR9715739	Root	2.340
SRR9715742	Root	4.468
SRR9715743	Root	4.629

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.278
SRR8749028	MeJA induced 9h	4.018
SRR8749029	MeJA induced 9h	3.326
SRR8749030	Uninduced	2.429
SRR8749031	Uninduced	1.349
SRR8749032	Uninduced	0.958

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.861
SRR8400027	Control - Root	11.083