Gene detail information of Glyur000910s00020566.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G20270.3 | 2.00E-72 | lipid-binding serum glycoprotein family protein |
| NR | KEH28522.1 | 9.85E-140 | lipid-binding serum glycoprotein-like protein [Medicago truncatula] |
| trEMBL | tr|A0A072UFR3|A0A072UFR3_MEDTR | 4.00E-140 | Lipid-binding serum glycoprotein-like protein {ECO:0000313|EMBL:KEH28522.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00910 | 10177 | 12025 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | F-box |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000910s00020566.1 | PF00646.28 | F-box | 3 | 41 | 0.0013 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.671 |
| SRR1783600 | control | 6.780 |
| SRR1783602 | moderate drought stress | 11.011 |
| SRR1811619 | moderate drought stress | 11.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.445 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.498 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.388 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.165 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.533 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.382 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.795 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.666 |
| SRR2868004 | Drought Stress (root) | 39.290 |
| SRR2967015 | Control (root) | 42.190 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.506 |
| SRR9715740 | Leaf | 33.068 |
| SRR9715741 | Leaf | 28.883 |
| SRR9715739 | Root | 5.415 |
| SRR9715742 | Root | 5.358 |
| SRR9715743 | Root | 4.750 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.974 |
| SRR8749028 | MeJA induced 9h | 19.573 |
| SRR8749029 | MeJA induced 9h | 6.550 |
| SRR8749030 | Uninduced | 19.701 |
| SRR8749031 | Uninduced | 11.576 |
| SRR8749032 | Uninduced | 11.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.372 |
| SRR8400027 | Control - Root | 11.532 |