Gene detail

Gene detail information of Glyur000907s00031044

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G35540.1	1.00E-58	DNAJ heat shock N-terminal domain-containing protein
NR	XP_007158242.1	0	hypothetical protein PHAVU_002G136100g [Phaseolus vulgaris]
COG	YP_706862.1	4.00E-09	chaperone protein [Rhodococcus jostii RHA1]
Swissprot	tr\|Q9FH28\|DNJ49_ARATH	8.00E-09	Chaperone protein dnaJ 49
trEMBL	tr\|V7CMW5\|V7CMW5_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW30236.1}

Sequence

Transcript Sequence

>Glyur000907s00031044.1
ATGGCAACGACGACGGAGGGAGAAGAAGAACGAGAGCTTCGAGAAGCTGCGCGGCTCAAAGCACTAGCAGAGTCCAAGTTCACAACCTCCAACAACCCCAAATCAGCTCTGAAGTACGCAAAGCGAGCCCAGCGTCTTGCCCCCAAGTTAGACGGCATAACAGAAACGGTTACCTCACTCAACATCCTCTCCGCCCCCGATTGGTACACCGTCCTCGGCGTGGACCCCTTCGCCACNACCACCGCCATTCGTAAACAGTACAATAACCTCTCTTCGCTTCTCCACCCCGACAACAACAAAAACCCCCACGTGACACCCTCCGAAGAAGCCCTCAAGCTCGTTGAAGAGGCCTTCCGCGTTCTCTCCGACAGGTCCCGCCGTAAGGACTACGACGCCAACCGAACATTCTGGACCGCGTGTTCCACTTGCAGGCTCTTGCACCAGTTCGAGAGGAGGTACGTTGGTCACAATCTGCTGTGTCCCGGTTGCAACAAGAGCTTCAAGGCCGTGGAAGCTGTCCACAACGGCGACGGCGACGGTGATGGGTCTTTCGAAGAGGAAGAGAAGACGACGTTGGGGGACTTTGTGTCGAGGAGGAAGAAGAAGAAGATGGGGGTGAAAGGGANANTGGGTAGTGAAAAAGGTGGGAGCTTGAAGGGTAATGGTGAAGTGGGTAGTGGTGGTGGGAGATTGAGANTGCGTACGGTTGGGGAGGTGTTGGAGAGGTCCAAACCCAAGAGGGTTAGAACCGAAGAGGAAACAATGACCTTGGCTGAATTTCAGTCTGAAGTGAAGAGAAAGGTGCAGCAAGAGAAGAAGATGAAGGAAAAGGAAGAGGAGGGAAGAACAGAGAAGAGGGGTTTGAACAAGAGTGTGAGGCCTGCAACCAAGGAGAAGCAGCATGAGGGTTCTGTAAAGAGAAAGGGGTTGAGAGTTGAGAAGAATAGGGATTCTNGTGGAGGGGAATTGGAAGCTATGGCGGTGGTGGATTCGGATTTTTATGANTTTGACAAGGATAGAGTGGAGAGGAGCTTTAGGAAAGGCCAAGTGTGGGCTGTGTATGATGATGATGATGGAATGCCAAGGAATTATGCTTTGATTGATGAAACCGTTTCGGCGAATCCTTTCGAAGTGATGATAAGTTGGTTGGATCTACAGAACAGTGGGGATGGGAAGATGGTTAGTACTAGGGAGAAATTGGGGTTTCACANACCTTGTGGGAGATTTAAAGTTGCCAGGAAGGCTTCCATAAGTTCAGTGAACATCTTTTCTCATGTTGTGGATTGCGACCGGGTGGCGCGGGAGGTTTACAAAATTTATCCCAAGAAGGGCTCAGTNTGGGCACTTTATAGTGAGTCAACTCTTGATGCAGATGAGGGAAAGAGAAANTATGACATTGTTGTGTTTTTGACAAGTTACAGTGAGATGAATGGTCTGAGCATGGCATATCTTGAGAAGGTTGATGGCTACAAGACAGTGTTTAAGAGACAAGAGATGGGGAGTCATGCCATTAGATTTCTTGGGATGGATGACATCTGGTTGATTTCTCATCAGATTCCCGCAAGGAAATTTCCTTCACTATATTGTGAAAATTTCTCTCTTCAATTCCTCGACTCTGTTCTGTTATTTGCTGATAAACTACTTGCGTTCAAGCAGGGAGCAGAACAGTTGTACATGAACCACCTGCGCCCCTTCTTGTTGAGGCATCAAGCAAGAGTTGATCAACTAATTTGCTTGCCCCTGTTTCTGGGTCTCGACGAGGAGCTTGTACCCGTGGGTTCAAGCATAAAGCCACTGCAGGCTATAAGAGTTCATGGGGAAACAAAGGGTAGTAGTCCATTTTCCAAATTGAAGTCCATGCAAATTGCGAGCATTGACGAGCCTTCACCACCACAGAAGTGGCTTGAACACTTGAAGTGGAAGCGGTTAGCGTCTCTTCCCAGTGGCTTCGATCATCTGAGCTCACTCCAGAGTCTCACCATTGAGAACTGTCCAGAGCTTGACCTTAACAGCACTTCCAGCAACGAATGGAAGGGTTTGAAAAACCTGCATTCTGTTGTCATAAAAGAGAATCCTAAACTCAAGTCGCTTCGAAAGGGGGTGGAAATGGTTACCTCTCTGCAGGATCTCGAGATTCATTACTGTCCTGAGCTGGCTCCTTTGCCTGAAACCATGAGCAACCTCAAATCACTTGGGAGGCTTCTGGCTTCCCTTCCTAAAGGGTTGAAGCTGAACGAGTCTCTGCATACTTTAATTGTTTTGGACCGTGCCTTGTTGATGCCACGGTGTCAGCCAAATACCGGCGATGATTGGCTGCAGATTTTGCATATCAAAAACAAACTGGCGAGGGAAAATTCTCAATGGAAAATGTCATACATGAGGGGCAGCTGCGATACCACGAGAACGATAATTGGAACACTTGCAATTGACAGGATTATAGCAAGTGCTGCACAAAAAGCAACTATCATGGAGCAGACGGAGAGAATCAGTGGCACAAGGCCAAACAGTACCTTCCAAGGCAAGCTAAGATATTGCATCAGCAATGAGAAACGTAGTAAATATCTTGTCATGCGAGAAGATGGGCAATCCAGTTTCTTGATGGTATCCACCGGGAACAGTGAAGGCGGCAGCAAACATCATGGTAGTGATGAGAGTGCCCACAATTGTGTAAGAGCTAGCTGTCGCTTTTGCCCATTCCTCTCCTACTTTAATTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00907	90904	95298	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000907s00031044.1	PF00226.26	DnaJ	67	131	1.10E-15
Glyur000907s00031044.1	PF11926.3	DUF3444	324	524	2.40E-58

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.635
SRR1783600	control	3.576
SRR1783602	moderate drought stress	5.666
SRR1811619	moderate drought stress	5.413

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.332
DRR006520	Root Summer glycyrrhizin high producing strain	2.937
DRR006521	Root Winter glycyrrhizin high producing strain	3.946
DRR006522	Root Winter glycyrrhizin high producing strain	3.724
DRR006523	Root Summer glycyrrhizin low producing strain	2.816
DRR006524	Root Summer glycyrrhizin low producing strain	3.477
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.039
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.892

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.490
SRR2868004	Drought Stress (root)	2.311
SRR2967015	Control (root)	2.287

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.509
SRR9715740	Leaf	1.742
SRR9715741	Leaf	1.009
SRR9715739	Root	1.066
SRR9715742	Root	1.591
SRR9715743	Root	0.964

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.355
SRR8749028	MeJA induced 9h	1.923
SRR8749029	MeJA induced 9h	1.151
SRR8749030	Uninduced	0.574
SRR8749031	Uninduced	0.231
SRR8749032	Uninduced	0.273

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.039
SRR8400027	Control - Root	3.307