Gene detail

Gene detail information of Glyur000906s00028230.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G25930.1	1.00E-177	Protein kinase family protein with leucine-rich repeat domain
NR	XP_004513050.1	0	PREDICTED: receptor-like protein kinase HSL1-like [Cicer arietinum]
COG	YP_004775215.1	6.00E-57	RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprot	tr\|Q9SGP2\|HSL1_ARATH	2.00E-144	Receptor-like protein kinase HSL1 (Precursor)
trEMBL	tr\|I1J4I6\|I1J4I6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G01090.1}

Sequence

Transcript Sequence

>Glyur000906s00028230.1
ATGACAATATTAGCCCCAACCAGTGTGAAGTTTCCATTTCACTCTCTTATTGTGACCTTGTTTCTCATGATCCTTTGNCATGCAAACTCTCAGCTGCATGATCAAGAACATGCAGTCCTAATGAAGATAAAGCTTCACCTACAAAACCCACCTTTCCTCAGCCACTGGGAAAACACATCAAACACCTCATCCCACTGCTCTTGGCCAGAGATAACCTGCAGTACCACTAGTGGTTCTGTCACAGGGTTGACTCTGGTCAACGCCAGCATCACACAAACCATACCCCCTTTCACATGTGACCTCACAAGCCTCACCNATGTTGATTTCAGCAGGAACCTCATCCCTGGTGGGTTCCCAACATCTCTCNTCAAGTGTTCCAAGCTTGAGTACCTTGACCTCTCAATGAATAACTTTGTTGGCAACATTCCTGATGACATTCACAAATTGGTTCACTTGCAGCATCTCAACCTTGGTTCCACCAACTTCACTGGTGACATTCCACCAAGTATTGGAAGGCTTAAGGAACTTAGATTCCTTCAGCTTCAGTTTTGTCACTTCAATGGAACCTTCCCTGGTGAGGCTATTGGCAACTTGTCCAACCTTGAGTTCTTGGATGTGTCCTCTAGCCCTTTGCTACCTCCTTCTAAGATCCCATCAAGCTTAACTAAGTTGAAAAACTTGAAGTTTTTTCACATGTATGGTTCAAACTTGGTAGGGGAAATCCCTGGAGAAATNGGAGAAATGGTGGCATTGGAGAACTTGGATATATCACAGAACCGTTTAACTGGACATATTCCAAGGGGTTTGTTCATGCTGAAGAACCTCAGCATAGTGTACCTTTTTGAGAACAAACTCTCTGGGGAGATACCAAGTGTGGTTGAAGCATTGAATTTGACCGAACTTGATCTTTCAGAGAACAATCTTGTAGGGAAGATACCAGATGATTTTGGAAAGCTCAAAAACTTAACATGGTTGTGTTTGTTTATGAATAACTTGTCCGGGGAGATTCCAGAAAGCATAGGCCTTCTTCCATCTCTTGTAGANTTTAAGGTCTTTATGAACAACTTGTCAGGTACNCTTCCTCCTGATTTTGGCCTTTACTCAAAGCTTAGAAGTTTTCATATTGGAACTAACAGTTTTACTGGAAGGCTACCAGAGAACTTGTGCTATCATGGTGAGTTGCAAAATTTAACTGTTTATGAAAACCATCTCACTGGGNAGTTGCCAGAATCACTTGGAAATTGCACCAGCTTGTTGGACCTGAAAATTTACAATAATGAGTTTTCTGGTAACATTCCCAGTGGTCTTTGGACTAATATCAATTTGGTGAATTTCATGGTGAGCCACAATAAGTTCACTGGTGAGCTCCCTGAAAGATTGGCTCCANATATCTCACTCTTTGAGATAAGTTACAATCAGTTTTATGGTAGAATTCCAGCTGGAGTGTCTTCCTGGACAAATGTGGTTGAGTTTAAAGCCAGTAAGAACTATCTCAATGGAAGTATTCCNCAAGAGATAACATCTCTTCCCAAGCTAACAACCCTTTTGCTTGATCAGAACCAGCTCACAGGGTCACTTCCATCAGATATAGTATCATGGAAGTCCCTAGTGACTCTAAATTTGAGCCAAAACCAACTCTCTGGACAAATTCCAGATTCAATTGGTCGTTTACCTGTCCTTAATCAGCTNTACCTGTCAGAAAATCAGTTGTCTGGCCATATTCCTTCTATACTTCCTAGACTCACCAATCTCAACCTATCTTCCAATCATTTGACTGGGAGGGTTCCTAGTGATTTTGAAATTCCTGTTTTTTCCACAAGNTTTTTGGACAATCCTGGCCTCTGTGCTGACACCCCAGCACTTAACCTTACCTCTTGCAANTTTGGCCTAATTGAAAGGCCAACCAAAGGCTCATCTTGGTCTCTTGGTCTGATTTTTAGCCTTGTGGCAGTTGCCTTCTTGCTTGCTTTGTCGGCATCAATCTTAATTATCAAACTCTACAAAAAAAGGAAGCATGCATTGGACAACTCATGGAAGATCATTTCCTTTCAAAGGCTGAGTTTCACAGAATCAAGCATAGTGTCCTCAATGACAGAACAAAACATCATTGGCAGTGGTGGATTCGGTACGGTATACCGTGTCCCCTTCGATGGTTTAGGAGATGTTGCGGTGAAAAAGATCATGAGCAACAGAAAGTTAACACAAAAACTTGTGAGCTCATTTCATGCAGAAGTTAAAATATTGAGCAATATTCGCCACAANAACATTGTGAAGTTGTTGTGCTGCATGATCTCCAATGAGGATTCCATGCTACTTGTGTATGAGTATCTGGAAAACAGTAGCCTAGATAGGTGGCTTCACAATAGGAAATATGTTCAAACAACTCGAGTGAGTGAAAAGATTGATGTGTTTAGCTTTGGGGTTATCCTATTGGAACTGACAACTGGGAAAGAAGCTAATTATGGTGATGAGCACTCATCTCTTGCAGAGTGGGCTTGGCGCCACATTCATGTAGGAAGCAACATAGAAGAGCTGCTAGACAAAGAAGTCATGGAAGGAAGTTACTTGGATGAGATGTGCTGTGTTTTCAAACTTGGGATCATGTGCACTGCAACACTTCCTTCCAGTAGGCCTTCCATGAAAGAGGCCGTGCACATATTGCTCCGATGTGAAGAAGGGTTTGTGCTTGGACAGAGGAATGTTGATGATGTTGTTCCTTTACTCAAGAACTCAAAGTGGGAGAGTAGTTTGGATTCTCAGCCACAGTCCCAGCTTCATGATCAAGAACATGAGGTCCTATTGAAGATAAAGCAATACCTTGATAACCCACCATTGCTGAGTCACTGGACCCAATCAAACTCCTCTCACTGTTCTTGGCCAGNGATCATTTGCACCAATGGCTCTATCACAAGACTAGTTCTGGTTGACACCAACATCACTCAAACCATACCCCCTTTCATATGTGACCTCAAAAACCTCACCCATGTTGATTTCAACAACAATTTCATCCCTGGGGAGTTCCCAACACACCTCTACAACTGTTCCAATTTGGAGTACCTTGACTTGTCAATGAACAATTTTGTTGGCAAGATTCCTAATGACATTCACAAATTGGTTAACTTGCAGTATCTTAACCTCAGTTACACAAACTTCTCTGGTGACATTCCAAAAAGTATTGGAAGGCTAAATGAACTGAGACATCTTGCACTTCAGTTTTGTCTATTCAATGGAACCTTCCCTGCTGAGATTGGCAACTTGTCCAATCTTGAAACCTTGGACTTGTCCTCCAACACCATGTTCCAACCTTTGAGCTTGCCCACCAATTGGACCAAGTTGAGCAAATTGAAGGTCTTTTATATGTATGAGTCCAATTTGGCTGGGGAAATCCCTGAAACAATAGGACAAATGGTGGCTTTGGAGAAATTGGATATATCAATAAACGGTTTAACTGGAAAAATTCCCAATGGTTTGTTCATGCTGAAGAATCTGAGCATATTGTTTCTTTCCAGGAACAGTCTTTCTGGGGAGATACCAAGTGTGGTTGAAGCATTGAATTTGACCATCATTGATCTTACAAGGAATCAGCTTTCAGGGAAAATACCAGNTGATTTTGGGAAGCTACAAAAGCTAACAGGCTTGGCTTTGTCTATGAACAACTTTTCAGGGGAGATACCACAAAGCATAGGCCTTCTTCCATCTCTGGTAGATTTCAAGGTCTTTATAAACAACTTGTCAGGTACCCTTCCTCCTGATTTTGGCCTTTACTCAAGGCTTAGAAGTTTTCATATTGCAACTAACAGTATTACTGGAAGGCTACCAGAGAACTTGTGCTATCATGGTGAGTTGCAAAATTTAACTGTTTATGAAAATCATCTCACTGGGGAGTTGCCAGAATCACTTGGAAACTGCACCAGCTTGTTGGAGCTGAAAATTTACAATAATGAGTTTTCTGGTAACATTCCCAGTGGTCTTTGGACTAATATCAATTTGGTGAATTTCATGGTGAGCCACAATAANTTCACTGGTGAGCTCCCTGAAAGATTGGCTCCAAATATCTCACTCTTTGACATAAGTTACAATCAGTTTTATGGTAGAATTCCAACTGGGGTATCTTCCTGGACAAATGTGGTTGAGTTCACAGCCAGTATGAACTATCTCAATGGAAGTATTCCACAAGAGATAACATCACTTCTCAAGCTAACAACCCTTTTGCTTGATCAGAACCACCTCACAGGTTCACTTCCATCTGAAATAGTATCATGGAAGTCCCTAGTGAATCTAAATTTGAGCCAAAACCAACTCTCTGGACAAATCCCAGATGCAATTGGTCGTTTACCTGTCCTTAATCAGCTTGACCTGTCAGAAAATCAATTCTCTGGCCAAATTCCTTCTATACCTCCTAGACTTACCAATCTCAATCTATCTTCCAATCACTTGACAGGGAGGGTTCCNAGTGAATTTGAAAATTCTGCATATGCTTCCAGCTTTTTGAACAATTCTGGTCTCTGTGCTGATACCCCANCACTGAACCTTACCNTGTGCAATTCCAGNCCTCAAAGTCAAAGCAAAGACTCATCTTTATCTCCTNCTTGGATCATAACCATTGTGGTGGTAGTTGTCATCTTAATGGTTTTGTTGGCATCATTCTTGATTATTAGACTCTACAGTAAAAGAAAGCAAGAATTGGATAACTCATGGAAGCTCATTTCCTTTCAAAGGCTGAGTTTCACTGAATCAGACATAGTGTCCTCAATGACAGAAAATAACATTATTGGCACTGGTGGATATGGNACAGTTTACCGTGTTGATGTTGATGGTTTAGGCTATGTTGCTGTGAAAAAGATTTGGGNGAACAAAAAGTTAGACCAGAATCTTGAGAAGTCATTTCATACTGAGGTTAGAATATTGAGCAACATTCGTCACAAGAACATTGTGAAGTTGTTGTGTTGNATCTCTAATGAGGATACCATGCTCCTTGTGTATGAGTATGTGGAGAACCGTAGCCTTGACAGGTGGCTTCACAAGAAGATTATTAAGCCATCAAGTGTGTCAGAATATGTTCAAACAACTCGAGTGAGTGAAAAGATTGATGTGTTTAGCTTTGGGGTTATCCTATTGGAACTAACAACTGGGAAAGAAGCTAANTATGGTGATGAGCACTCATCTCTTGCAGAGTGGGCTTGGAGGCACATTCATGCAGGAAGCAACATAGAAGAGCTGCTAGACAAAGAAGTCATGGAACCAAGTTACTTGGATGGAATGTGTAAGGTTTTCAAACTTGGGGTCATGTGCACTGCAACACTTCCTTCTAGTAGACCTTCCATGAAGGAGGTGCTGCAAGTATTGCTCCAGCAGGGAGAACCATTTGCCTGTAGAGAGAGAAATATTGACCAATCTGATTTTGCTCCCCTTCTTAGAAATTCGAAAAGAGAAAACAACAACCTCAAAACAACCAGATGA

Protein Sequence

>Glyur000906s00028230.1
MTILAPTSVKFPFHSLIVTLFLMILXHANSQLHDQEHAVLMKIKLHLQNPPFLSHWENTSNTSSHCSWPEITCSTTSGSVTGLTLVNASITQTIPPFTCDLTSLTXVDFSRNLIPGGFPTSLXKCSKLEYLDLSMNNFVGNIPDDIHKLVHLQHLNLGSTNFTGDIPPSIGRLKELRFLQLQFCHFNGTFPGEAIGNLSNLEFLDVSSSPLLPPSKIPSSLTKLKNLKFFHMYGSNLVGEIPGEXGEMVALENLDISQNRLTGHIPRGLFMLKNLSIVYLFENKLSGEIPSVVEALNLTELDLSENNLVGKIPDDFGKLKNLTWLCLFMNNLSGEIPESIGLLPSLVXFKVFMNNLSGTLPPDFGLYSKLRSFHIGTNSFTGRLPENLCYHGELQNLTVYENHLTGXLPESLGNCTSLLDLKIYNNEFSGNIPSGLWTNINLVNFMVSHNKFTGELPERLAPXISLFEISYNQFYGRIPAGVSSWTNVVEFKASKNYLNGSIPQEITSLPKLTTLLLDQNQLTGSLPSDIVSWKSLVTLNLSQNQLSGQIPDSIGRLPVLNQLYLSENQLSGHIPSILPRLTNLNLSSNHLTGRVPSDFEIPVFSTXFLDNPGLCADTPALNLTSCXFGLIERPTKGSSWSLGLIFSLVAVAFLLALSASILIIKLYKKRKHALDNSWKIISFQRLSFTESSIVSSMTEQNIIGSGGFGTVYRVPFDGLGDVAVKKIMSNRKLTQKLVSSFHAEVKILSNIRHXNIVKLLCCMISNEDSMLLVYEYLENSSLDRWLHNRKYVQTTRVSEKIDVFSFGVILLELTTGKEANYGDEHSSLAEWAWRHIHVGSNIEELLDKEVMEGSYLDEMCCVFKLGIMCTATLPSSRPSMKEAVHILLRCEEGFVLGQRNVDDVVPLLKNSKWESSLDSQPQSQLHDQEHEVLLKIKQYLDNPPLLSHWTQSNSSHCSWPXIICTNGSITRLVLVDTNITQTIPPFICDLKNLTHVDFNNNFIPGEFPTHLYNCSNLEYLDLSMNNFVGKIPNDIHKLVNLQYLNLSYTNFSGDIPKSIGRLNELRHLALQFCLFNGTFPAEIGNLSNLETLDLSSNTMFQPLSLPTNWTKLSKLKVFYMYESNLAGEIPETIGQMVALEKLDISINGLTGKIPNGLFMLKNLSILFLSRNSLSGEIPSVVEALNLTIIDLTRNQLSGKIPXDFGKLQKLTGLALSMNNFSGEIPQSIGLLPSLVDFKVFINNLSGTLPPDFGLYSRLRSFHIATNSITGRLPENLCYHGELQNLTVYENHLTGELPESLGNCTSLLELKIYNNEFSGNIPSGLWTNINLVNFMVSHNXFTGELPERLAPNISLFDISYNQFYGRIPTGVSSWTNVVEFTASMNYLNGSIPQEITSLLKLTTLLLDQNHLTGSLPSEIVSWKSLVNLNLSQNQLSGQIPDAIGRLPVLNQLDLSENQFSGQIPSIPPRLTNLNLSSNHLTGRVPSEFENSAYASSFLNNSGLCADTPXLNLTXCNSXPQSQSKDSSLSPXWIITIVVVVVILMVLLASFLIIRLYSKRKQELDNSWKLISFQRLSFTESDIVSSMTENNIIGTGGYGTVYRVDVDGLGYVAVKKIWXNKKLDQNLEKSFHTEVRILSNIRHKNIVKLLCXISNEDTMLLVYEYVENRSLDRWLHKKIIKPSSVSEYVQTTRVSEKIDVFSFGVILLELTTGKEAXYGDEHSSLAEWAWRHIHAGSNIEELLDKEVMEPSYLDGMCKVFKLGVMCTATLPSSRPSMKEVLQVLLQQGEPFACRERNIDQSDFAPLLRNSKRENNNLKTTR

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00906	7117	23583	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.12.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000906s00028230.1	PF08263.7	LRRNT_2	34	74	1.40E-06
Glyur000906s00028230.1	PF13855.1	LRR_8	103	161	2.50E-07
Glyur000906s00028230.1	PF00560.28	LRR_1	251	270	0.83
Glyur000906s00028230.1	PF00560.28	LRR_1	297	319	0.0076
Glyur000906s00028230.1	PF00560.28	LRR_1	535	557	0.32
Glyur000906s00028230.1	PF13516.1	LRR_6	578	593	1.7
Glyur000906s00028230.1	PF00069.20	Pkinase	699	794	5.30E-13
Glyur000906s00028230.1	PF08263.7	LRRNT_2	927	964	2.90E-06
Glyur000906s00028230.1	PF13855.1	LRR_8	992	1050	2.70E-07
Glyur000906s00028230.1	PF00560.28	LRR_1	1185	1207	0.2
Glyur000906s00028230.1	PF13516.1	LRR_6	1422	1443	0.37
Glyur000906s00028230.1	PF00560.28	LRR_1	1468	1489	0.57
Glyur000906s00028230.1	PF00069.20	Pkinase	1587	1688	9.20E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.253
SRR1783600	control	1.277
SRR1783602	moderate drought stress	0.875
SRR1811619	moderate drought stress	0.903

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.315
DRR006520	Root Summer glycyrrhizin high producing strain	1.355
DRR006521	Root Winter glycyrrhizin high producing strain	2.765
DRR006522	Root Winter glycyrrhizin high producing strain	2.607
DRR006523	Root Summer glycyrrhizin low producing strain	3.501
DRR006524	Root Summer glycyrrhizin low producing strain	3.325
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.104
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.896

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.684
SRR2868004	Drought Stress (root)	7.188
SRR2967015	Control (root)	4.186

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.402
SRR9715740	Leaf	9.390
SRR9715741	Leaf	14.331
SRR9715739	Root	1.753
SRR9715742	Root	9.676
SRR9715743	Root	8.687

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.105
SRR8749028	MeJA induced 9h	4.425
SRR8749029	MeJA induced 9h	1.201
SRR8749030	Uninduced	6.884
SRR8749031	Uninduced	5.497
SRR8749032	Uninduced	3.338

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.830
SRR8400027	Control - Root	3.366