Gene detail information of Glyur000904s00024082 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G39900.1 | 6.00E-24 | |
| NR | KHN44344.1 | 6.36E-120 | hypothetical protein glysoja_014385 [Glycine soja] |
| trEMBL | tr|C6TDK5|C6TDK5_SOYBN | 4.00E-120 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G38100.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00904 | 102131 | 106449 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 98.963 |
| SRR1783600 | control | 98.883 |
| SRR1783602 | moderate drought stress | 33.574 |
| SRR1811619 | moderate drought stress | 33.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 46.333 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 45.745 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 32.633 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 31.820 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 51.580 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 51.938 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 46.372 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 46.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.494 |
| SRR2868004 | Drought Stress (root) | 21.552 |
| SRR2967015 | Control (root) | 17.463 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.699 |
| SRR9715740 | Leaf | 2.748 |
| SRR9715741 | Leaf | 2.208 |
| SRR9715739 | Root | 14.343 |
| SRR9715742 | Root | 31.776 |
| SRR9715743 | Root | 27.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.881 |
| SRR8749028 | MeJA induced 9h | 5.976 |
| SRR8749029 | MeJA induced 9h | 5.663 |
| SRR8749030 | Uninduced | 4.187 |
| SRR8749031 | Uninduced | 1.421 |
| SRR8749032 | Uninduced | 1.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 106.580 |
| SRR8400027 | Control - Root | 98.419 |