Gene detail information of Glyur000904s00024080


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G39880.14.00E-49Ribosomal protein L23/L15e family protein
NRXP_004502423.11.96E-87PREDICTED: uncharacterized protein LOC101493331 [Cicer arietinum]
COGYP_001143774.18.00E-1050S ribosomal protein L23 [Aeromonas salmonicida subsp. salmonicida A449]
trEMBLtr|V7AF52|V7AF52_PHAVU1.00E-81Uncharacterized protein {ECO:0000313|EMBL:ESW04202.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold009049484995412+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0000166  nucleotide binding

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000904s00024080.1PF00276.15Ribosomal_L2331954.50E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control26.332
SRR1783600control25.876
SRR1783602moderate drought stress27.842
SRR1811619moderate drought stress27.548

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain31.457
DRR006520Root Summer glycyrrhizin high producing strain31.432
DRR006521Root Winter glycyrrhizin high producing strain25.804
DRR006522Root Winter glycyrrhizin high producing strain26.373
DRR006523Root Summer glycyrrhizin low producing strain35.951
DRR006524Root Summer glycyrrhizin low producing strain35.319
DRR006525Leaf Summer glycyrrhizin high producing strain12.062
DRR006526Leaf Summer glycyrrhizin high producing strain11.155

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)51.718
SRR2868004Drought Stress (root)42.618
SRR2967015Control (root)45.369

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf13.926
SRR9715740Leaf19.482
SRR9715741Leaf17.863
SRR9715739Root27.022
SRR9715742Root20.585
SRR9715743Root23.569

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h75.519
SRR8749028MeJA induced 9h58.131
SRR8749029MeJA induced 9h62.764
SRR8749030Uninduced26.688
SRR8749031Uninduced7.545
SRR8749032Uninduced11.082

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root30.041
SRR8400027Control - Root29.720

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved