Gene detail information of Glyur000904s00024073 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G10210.1 | 7.00E-11 | |
| NR | KEH35304.1 | 9.08E-56 | C2 domain protein [Medicago truncatula] |
| trEMBL | tr|A0A072UZT9|A0A072UZT9_MEDTR | 3.00E-56 | C2 domain protein {ECO:0000313|EMBL:KEH35304.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00904 | 65264 | 65833 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.217 |
| SRR1783600 | control | 0.286 |
| SRR1783602 | moderate drought stress | 0.628 |
| SRR1811619 | moderate drought stress | 0.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.007 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.551 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.582 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.483 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.188 |
| SRR2868004 | Drought Stress (root) | 82.804 |
| SRR2967015 | Control (root) | 77.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.206 |
| SRR9715742 | Root | 0.815 |
| SRR9715743 | Root | 0.653 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.901 |
| SRR8749028 | MeJA induced 9h | 34.004 |
| SRR8749029 | MeJA induced 9h | 3.512 |
| SRR8749030 | Uninduced | 1.307 |
| SRR8749031 | Uninduced | 1.555 |
| SRR8749032 | Uninduced | 1.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.793 |
| SRR8400027 | Control - Root | 1.754 |