Gene detail information of Glyur000904s00024072 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G10210.1 | 3.00E-19 | |
| NR | AFK40931.1 | 2.02E-71 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SKY9|I3SKY9_LOTJA | 8.00E-72 | Uncharacterized protein {ECO:0000313|EMBL:AFK40931.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00904 | 59773 | 60351 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.219 |
| SRR1783600 | control | 0.254 |
| SRR1783602 | moderate drought stress | 3.102 |
| SRR1811619 | moderate drought stress | 2.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.647 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.218 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.193 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.188 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.285 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.361 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 64.409 |
| SRR2868004 | Drought Stress (root) | 154.847 |
| SRR2967015 | Control (root) | 148.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.058 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.110 |
| SRR9715739 | Root | 0.607 |
| SRR9715742 | Root | 3.908 |
| SRR9715743 | Root | 4.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 63.827 |
| SRR8749028 | MeJA induced 9h | 188.188 |
| SRR8749029 | MeJA induced 9h | 56.490 |
| SRR8749030 | Uninduced | 27.088 |
| SRR8749031 | Uninduced | 63.019 |
| SRR8749032 | Uninduced | 76.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.316 |
| SRR8400027 | Control - Root | 5.896 |