Gene detail information of Glyur000902s00028780 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G73380.1 | 9.00E-108 | |
| NR | XP_004512681.1 | 0 | PREDICTED: uncharacterized protein LOC101496834 [Cicer arietinum] |
| trEMBL | tr|G7KPC4|G7KPC4_MEDTR | 0 | DUF1308 family protein {ECO:0000313|EMBL:AES75999.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00902 | 72322 | 77381 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000902s00028780.1 | PF07000.6 | DUF1308 | 42 | 501 | 3.20E-62 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.630 |
| SRR1783600 | control | 10.019 |
| SRR1783602 | moderate drought stress | 11.355 |
| SRR1811619 | moderate drought stress | 11.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.782 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.165 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.424 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.064 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.085 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.135 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.257 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.991 |
| SRR2868004 | Drought Stress (root) | 2.234 |
| SRR2967015 | Control (root) | 2.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.735 |
| SRR9715740 | Leaf | 12.452 |
| SRR9715741 | Leaf | 15.494 |
| SRR9715739 | Root | 1.318 |
| SRR9715742 | Root | 8.629 |
| SRR9715743 | Root | 7.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.937 |
| SRR8749028 | MeJA induced 9h | 2.044 |
| SRR8749029 | MeJA induced 9h | 2.148 |
| SRR8749030 | Uninduced | 1.897 |
| SRR8749031 | Uninduced | 1.102 |
| SRR8749032 | Uninduced | 1.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.800 |
| SRR8400027 | Control - Root | 16.350 |