Gene detail information of Glyur000902s00028774 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G73320.1 | 2.00E-64 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | XP_004512683.1 | 4.80E-111 | PREDICTED: protein-lysine methyltransferase METTL21D-like [Cicer arietinum] |
| trEMBL | tr|G7KPC6|G7KPC6_MEDTR | 4.00E-111 | Methyltransferase family protein {ECO:0000313|EMBL:AES76001.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00902 | 42928 | 45354 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000902s00028774.1 | PF10294.4 | Methyltransf_16 | 1 | 148 | 8.30E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.987 |
| SRR1783600 | control | 18.675 |
| SRR1783602 | moderate drought stress | 13.744 |
| SRR1811619 | moderate drought stress | 12.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.579 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.006 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.522 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.669 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.244 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.562 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.229 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.585 |
| SRR2868004 | Drought Stress (root) | 13.431 |
| SRR2967015 | Control (root) | 11.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.810 |
| SRR9715740 | Leaf | 15.495 |
| SRR9715741 | Leaf | 17.609 |
| SRR9715739 | Root | 22.259 |
| SRR9715742 | Root | 23.245 |
| SRR9715743 | Root | 24.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.485 |
| SRR8749028 | MeJA induced 9h | 14.580 |
| SRR8749029 | MeJA induced 9h | 12.790 |
| SRR8749030 | Uninduced | 6.901 |
| SRR8749031 | Uninduced | 4.724 |
| SRR8749032 | Uninduced | 8.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.896 |
| SRR8400027 | Control - Root | 36.595 |