Gene detail

Gene detail information of Glyur000900s00031455.3

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G58640.2	0	Mitogen activated protein kinase kinase kinase-related
NR	XP_004487152.1	0	PREDICTED: serine/threonine-protein kinase EDR1-like isoform X2 [Cicer arietinum]
COG	YP_828710.1	7.00E-21	serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076]
Swissprot	tr\|Q05609\|CTR1_ARATH	7.00E-27	Serine/threonine-protein kinase CTR1
trEMBL	tr\|G7IU31\|G7IU31_MEDTR	0	MAP kinase kinase kinase-like protein {ECO:0000313\|EMBL:AES67381.2}

Sequence

Transcript Sequence

>Glyur000900s00031455.3
GAATCTGTTTCTACACTGCTCTAGTGTAAAACCTTTGGAACAAGCTCTTTTGTATGTCTGGTTGCCTTGGGGGTTTATGTTAGCTTCAAACAATTGATTTTACTTTTCANGATATACAAGAGGGGAATATCTTGTGGTGATTTCCATTGTTATAAAGTAGTTGATTTATTTAGTTGGAGTNTCTCCGGAAGCAACAGAGTCTATATGTGCAATGCAATTTTAAGCAGAACTGCTATTCAACTTAAAAAAACAATAGATTTATCATTTTGGCATGTTTATGGTATATGGTCAATTGCTATTTCAAGGGGTTGTTCTTGAGGGATTATATAATACTAAGTTGCTTGACCATTGATGTATTTTTCTTTTTCAGGCTTCTTTGGAGAAGTCTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTCTGTAATGAGATATCTATTCTTAGGTACTTGGTTGTTGATATGCTGTTTGTCAGCCTTTTTCTTTTGTGTCCAACATTTTCTGACTCTGTTTCTTTTTTTCTTTTTGAATTTTGGTATTTATTTTCATCCAGCCGGCTCCGACATCCTAATGTCATCTTATTTCTTGGTGCATGCACAAGGCCTCCACGTTTGTCAATGGTTACAGAATATATGGAGATGGGATCATTGTATTACTTGATACATTTGAGCGGTCAGAAGAAAAAGCTCAGTTGGCGGAGAAGACTAAAGATGTTACGTGACATATGCAAGTAAGTATTATGGTTATGCATGCTTTTCAGAATCTTATCCTCTTCATTGGCATTTATGCTAAACAGGTATAAAGAATAATTAAATAACAGAGCAACGGAATAATTAAATTAGGTGCATTCAGGGAGTGCTTATTTAGTTTCTTCTCATTTAACAATTTAAACTTAATGTGAATTTTTAATTTCTTTGATGAGAACATTAGAAGAAAAGCAATAAAGAAAAAAAAATAACAAATCATTGAATTGTGCTATTCATATCGGTATATAAAGAAAAAAAATTAACAAATCGTTAGAGTACACTAAAACCATTATGTTACCTAGCTCCCATTAACTGTAGTTTAGTCAAGTCTGGTTAACTGTTACCTATAGCCTAGTCAGNTCAGTTACTGACAGTTGTAATCAGTTGCTGATTGGTAGTTATTCTATTGTAACTTGCNCTCGCTCCTTCTCATTTTAAGTGTCCTGTTTGGATTATTTTTTGTCTCAAATGATTTGTCATTTTAGAATATCAAGAAAGTATTCATTACCCTTTTCCAATATTATCCTTATTTATTGGTATTTCAATTTACATTACATCAATTAATATTGTCTACTGTCTACCTAACTACTACTGCAATAAATGGGAGNACAAGGGTATTTTGGTTAGAACACATTATTTTGCCACGAGAATTAGTATAACTAATCTGTTTCTTAAGATGTGTGCATTACCTTAAACAACAGATAAAATGAGACANAGGGAGTAAGAGCTAACAGCTCAGTAGGCTATGCCTATACAGTATTGCATAACAATTCACATCNGTGAAAATATTCAGAATTCAGATTACAATTCCTTTCTCTTTTTCGCATTCTGTTTTCTTACATGGTATCAAGAGCTTAAAGATCCATAGCCACCAGAGATTCCTTCTCTCCATCTACCCAACCTCCTACGATGAACCCTAATCCAATTTCAATTCACCCACCACCTCCAACACCTCCAGCAGACCCAGTTCGAGTGGTGACACCCCACTACCTTCTCACTTGTAACACCCNAAGAGTATGCGAGCTGTTGCCGTCAGTATATATCAAATCACGCNATTCAAATTGTGAATCAGTCTAATAACTATGTTTTCAATTGGATGAAGATGTTGATAAAATTAAGTTTTGTTCAATTGCTAATTAGAAGTATTGGGCTTTATTTATATATTACCACATGTTATCAAATGCGAATGACATACGGCATACCATTTCAGTCAAGCCATTATTTGTTGAATTGAAGTTGTGTTTTGTAATACTACTGGTGTCAACAAATTTCATGTGTTACCTCTTTTTTTAATCATAATTTGGGTGAGGTATTACCTCATTTCAAATGTTAATCGCTTAACTGTTTCACAATATTGGAAAACTACATTTGATCTGTCAACATTGATGTGAACACCTTGGTTGTGTGTAGGGGTTTGATGTGCATACATCGTATGAAGATTGTTCACCGTGATCTGAAAAGTGCAAATTGTCTTGTGAACAAGCATTGGACTGTGAAAATCTGTGATTTTGGGCTTTCAAGAATAATGATAGATTCTCCCATGAGAGATTCTTCATCGGCTGGAACTCCAGAATGGATGGCTCCTGAACAAATCCGAAATGAACCATTCACTGAAAAATGTGATATCTTTAGCCTTGGGGTGATAATGTGGGAGCTGTGCACCTTGAACAGGCCATGGGAAGGCGTACCGCCGGAGAGGGTGGTTTATTCCGTTGCTAATGAGGGTTCCAGATTGGAGATTCCTGAAGGCCCTTTAGGCAGACTGATTTCAGACTGCTGGGCAGAATCACATGAGCGGCCAAGTTGTGATGAGATTCTTTCTCGTTTGGTGGACATCGATTATTCNTTGTGCTGATGCAATTTTATATCTTTTGTACATAGAAAACTTTGGGTAGAGTTGTTAAATTGTGTTATCGGCTGATGTTGTGGACTACTGTGAATTTTGTTCTCCTCAGAATGTGCCAAAATATAAATCGCTGCTGCTCTTCTTGTCTTACCCCTGTGCTGCAAACTTNTCTCTATTTGGGGTAACGAGAGAAAGATGAATTAAATACACGTCTCTTGCATATCTTTTGTGCAATGAAAATAACAGATCTATTTCTAGTCGAGTATAGAATGATTTATTCTTCACGTATAAAAGGTTAGGCAGGCGAGAAATAGGAAATAAGCCGAAGTGGCATGATGAACATTCTTTCTTTTTTTCCTCCAAATTTCGTATGAGTATCACATCAGTCACTGATTTGATGCCTATTAAATGCGTCTTCAAAGCGGCTACACGAANTGACCCTCATCTCTGTACTCATGTCGCTTTTTGGCGCCGGATAATAATCTGATCTGACCTCAGCNGCATGTCAATTTTCATGAAATGCTCATGAGCTGTACCATGAATAAAAAGTTTCCAGAGCATAACATTCTCGTAACAAGGCAGCAGCAGCTGGAAGTGATATACTCCTTCGGTTCACATCTTCGACTTGTGGCCAGTAATCAAGTTCATCTAGACTCATAATACCAATTCCATTCAGGAAGAACCTCTCCCACAGGTCCAAATCCATGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00900	81347	96470	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:2.1.3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000900s00031455.3	PF07714.12	Pkinase_Tyr	3	137	6.10E-33

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	21.378
SRR1783600	control	21.348
SRR1783602	moderate drought stress	9.927
SRR1811619	moderate drought stress	10.173

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.239
DRR006520	Root Summer glycyrrhizin high producing strain	10.237
DRR006521	Root Winter glycyrrhizin high producing strain	7.250
DRR006522	Root Winter glycyrrhizin high producing strain	7.565
DRR006523	Root Summer glycyrrhizin low producing strain	20.553
DRR006524	Root Summer glycyrrhizin low producing strain	20.812
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.944
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.831

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	19.148
SRR2868004	Drought Stress (root)	14.889
SRR2967015	Control (root)	12.238

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	12.407
SRR9715740	Leaf	10.090
SRR9715741	Leaf	12.277
SRR9715739	Root	4.999
SRR9715742	Root	15.032
SRR9715743	Root	13.341

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.822
SRR8749028	MeJA induced 9h	13.048
SRR8749029	MeJA induced 9h	7.882
SRR8749030	Uninduced	7.920
SRR8749031	Uninduced	2.468
SRR8749032	Uninduced	2.101

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.531
SRR8400027	Control - Root	18.873