Gene detail information of Glyur000900s00031454.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G58630.1 | 4.00E-64 | sequence-specific DNA binding transcription factors |
| NR | XP_003543305.1 | 4.31E-135 | PREDICTED: uncharacterized protein LOC100811154 [Glycine max] |
| Swissprot | tr|Q9LJG8|ASIL2_ARATH | 6.00E-52 | Trihelix transcription factor ASIL2 {ECO:0000305} |
| trEMBL | tr|I1M3L6|I1M3L6_SOYBN | 2.00E-135 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G36650.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00900 | 78236 | 79189 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Trihelix |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000900s00031454.1 | PF13837.1 | Myb_DNA-bind_4 | 25 | 118 | 2.50E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.643 |
| SRR1783600 | control | 2.413 |
| SRR1783602 | moderate drought stress | 3.521 |
| SRR1811619 | moderate drought stress | 3.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.724 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.661 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.515 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.721 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.409 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.152 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.759 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.599 |
| SRR2868004 | Drought Stress (root) | 5.847 |
| SRR2967015 | Control (root) | 6.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.880 |
| SRR9715740 | Leaf | 3.610 |
| SRR9715741 | Leaf | 4.344 |
| SRR9715739 | Root | 5.724 |
| SRR9715742 | Root | 6.844 |
| SRR9715743 | Root | 5.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.718 |
| SRR8749028 | MeJA induced 9h | 4.964 |
| SRR8749029 | MeJA induced 9h | 3.830 |
| SRR8749030 | Uninduced | 1.727 |
| SRR8749031 | Uninduced | 0.607 |
| SRR8749032 | Uninduced | 1.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.225 |
| SRR8400027 | Control - Root | 9.563 |