Gene detail information of Glyur000899s00033737 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25240.1 | 1.00E-05 | |
| NR | KEH38092.1 | 2.90E-32 | stress induced protein [Medicago truncatula] |
| trEMBL | tr|A0A072V8C8|A0A072V8C8_MEDTR | 1.00E-32 | Stress induced protein {ECO:0000313|EMBL:KEH38092.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00899 | 96104 | 96338 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.152 |
| SRR1783600 | control | 0.205 |
| SRR1783602 | moderate drought stress | 0.514 |
| SRR1811619 | moderate drought stress | 0.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.929 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.275 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.060 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.351 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.266 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.184 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.813 |
| SRR2868004 | Drought Stress (root) | 7.647 |
| SRR2967015 | Control (root) | 15.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.941 |
| SRR9715740 | Leaf | 3.918 |
| SRR9715741 | Leaf | 3.283 |
| SRR9715739 | Root | 7.499 |
| SRR9715742 | Root | 14.464 |
| SRR9715743 | Root | 12.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.761 |
| SRR8749028 | MeJA induced 9h | 0.681 |
| SRR8749029 | MeJA induced 9h | 0.668 |
| SRR8749030 | Uninduced | 2.092 |
| SRR8749031 | Uninduced | 0.703 |
| SRR8749032 | Uninduced | 0.961 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.976 |
| SRR8400027 | Control - Root | 3.099 |