Gene detail information of Glyur000898s00033189 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G28430.1 | 6.00E-69 | |
| NR | KEH41895.1 | 0 | hypothetical protein MTR_1g057130 [Medicago truncatula] |
| trEMBL | tr|A0A072VUZ9|A0A072VUZ9_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:KEH41895.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00898 | 70941 | 86556 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000898s00033189.1 | PF09758.4 | FPL | 42 | 184 | 2.80E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.287 |
| SRR1783600 | control | 2.184 |
| SRR1783602 | moderate drought stress | 3.148 |
| SRR1811619 | moderate drought stress | 3.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.011 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.775 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.426 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.192 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.038 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.040 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.429 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.572 |
| SRR2868004 | Drought Stress (root) | 6.687 |
| SRR2967015 | Control (root) | 6.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.019 |
| SRR9715740 | Leaf | 3.641 |
| SRR9715741 | Leaf | 3.322 |
| SRR9715739 | Root | 1.269 |
| SRR9715742 | Root | 2.575 |
| SRR9715743 | Root | 2.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.052 |
| SRR8749028 | MeJA induced 9h | 2.119 |
| SRR8749029 | MeJA induced 9h | 1.520 |
| SRR8749030 | Uninduced | 1.334 |
| SRR8749031 | Uninduced | 1.210 |
| SRR8749032 | Uninduced | 1.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.322 |
| SRR8400027 | Control - Root | 11.778 |