Gene detail information of Glyur000897s00031612 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AES66938.2 | 9.69E-53 | disease resistance protein (TIR-NBS-LRR class), putative [Medicago truncatula] |
| trEMBL | tr|G7IM52|G7IM52_MEDTR | 4.00E-53 | Disease resistance protein (TIR-NBS-LRR class), putative {ECO:0000313|EMBL:AES66938.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00897 | 86362 | 86847 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.012 |
| SRR1783600 | control | 3.270 |
| SRR1783602 | moderate drought stress | 6.542 |
| SRR1811619 | moderate drought stress | 5.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.997 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.118 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.247 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.705 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.265 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.786 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.396 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.601 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.995 |
| SRR2868004 | Drought Stress (root) | 3.830 |
| SRR2967015 | Control (root) | 4.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.688 |
| SRR9715740 | Leaf | 6.607 |
| SRR9715741 | Leaf | 5.435 |
| SRR9715739 | Root | 1.440 |
| SRR9715742 | Root | 5.374 |
| SRR9715743 | Root | 4.862 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.273 |
| SRR8749028 | MeJA induced 9h | 3.138 |
| SRR8749029 | MeJA induced 9h | 1.446 |
| SRR8749030 | Uninduced | 1.739 |
| SRR8749031 | Uninduced | 1.016 |
| SRR8749032 | Uninduced | 0.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.545 |
| SRR8400027 | Control - Root | 8.522 |