Gene detail information of Glyur000894s00023635 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18540.1 | 2.00E-30 | |
| NR | NP_001236669.1 | 5.01E-71 | uncharacterized protein LOC100306299 [Glycine max] |
| trEMBL | tr|C6SYU3|C6SYU3_SOYBN | 2.00E-71 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G16520.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00894 | 59647 | 61759 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.232 |
| SRR1783600 | control | 8.211 |
| SRR1783602 | moderate drought stress | 7.253 |
| SRR1811619 | moderate drought stress | 6.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.286 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.923 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.794 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.701 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.147 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.949 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.440 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.640 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.043 |
| SRR2868004 | Drought Stress (root) | 28.159 |
| SRR2967015 | Control (root) | 25.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.534 |
| SRR9715740 | Leaf | 14.040 |
| SRR9715741 | Leaf | 17.525 |
| SRR9715739 | Root | 0.464 |
| SRR9715742 | Root | 5.367 |
| SRR9715743 | Root | 3.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.714 |
| SRR8749028 | MeJA induced 9h | 13.417 |
| SRR8749029 | MeJA induced 9h | 11.906 |
| SRR8749030 | Uninduced | 21.363 |
| SRR8749031 | Uninduced | 12.789 |
| SRR8749032 | Uninduced | 13.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.160 |
| SRR8400027 | Control - Root | 12.540 |