Gene detail information of Glyur000893s00030780 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17480.1 | 3.00E-34 | Seven transmembrane MLO family protein |
| NR | XP_007158026.1 | 2.58E-41 | hypothetical protein PHAVU_002G117900g [Phaseolus vulgaris] |
| Swissprot | tr|O22757|MLO8_ARATH | 5.00E-39 | MLO-like protein 8 |
| trEMBL | tr|V7CL59|V7CL59_PHAVU | 1.00E-41 | MLO-like protein {ECO:0000256|RuleBase:RU280816} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00893 | 87542 | 89310 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000893s00030780.1 | PF03094.10 | Mlo | 87 | 176 | 8.40E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.292 |
| SRR1783600 | control | 4.879 |
| SRR1783602 | moderate drought stress | 1.954 |
| SRR1811619 | moderate drought stress | 2.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.300 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.611 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.248 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.247 |
| SRR2868004 | Drought Stress (root) | 0.164 |
| SRR2967015 | Control (root) | 0.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.556 |
| SRR9715740 | Leaf | 0.623 |
| SRR9715741 | Leaf | 1.392 |
| SRR9715739 | Root | 0.677 |
| SRR9715742 | Root | 0.899 |
| SRR9715743 | Root | 0.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.142 |
| SRR8749028 | MeJA induced 9h | 0.156 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.097 |
| SRR8400027 | Control - Root | 9.943 |