Gene detail information of Glyur000893s00030772 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004516637.1 | 4.84E-11 | PREDICTED: uncharacterized calcium-binding protein At1g02270-like [Cicer arietinum] |
| trEMBL | tr|I1JH84|I1JH84_SOYBN | 2.00E-10 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G38700.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00893 | 2782 | 3879 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.819 |
| SRR1783600 | control | 14.437 |
| SRR1783602 | moderate drought stress | 16.950 |
| SRR1811619 | moderate drought stress | 17.337 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.609 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.019 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.519 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.154 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.461 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.343 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.150 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.026 |
| SRR9715740 | Leaf | 13.372 |
| SRR9715741 | Leaf | 21.520 |
| SRR9715739 | Root | 1.369 |
| SRR9715742 | Root | 10.173 |
| SRR9715743 | Root | 9.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.374 |
| SRR8749029 | MeJA induced 9h | 0.083 |
| SRR8749030 | Uninduced | 1.283 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.055 |
| SRR8400027 | Control - Root | 4.692 |