Gene detail information of Glyur000892s00021917 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G02555.1 | 1.00E-14 | |
| NR | KHN20730.1 | 9.83E-48 | hypothetical protein glysoja_019047 [Glycine soja] |
| trEMBL | tr|C6SVI4|C6SVI4_SOYBN | 2.00E-47 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G31670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00892 | 61838 | 63581 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 184.620 |
| SRR1783600 | control | 190.200 |
| SRR1783602 | moderate drought stress | 520.633 |
| SRR1811619 | moderate drought stress | 514.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 983.664 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 965.244 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 679.823 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 652.016 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1196.547 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1191.147 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 67.276 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 62.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 207.394 |
| SRR2868004 | Drought Stress (root) | 316.133 |
| SRR2967015 | Control (root) | 507.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 173.175 |
| SRR9715740 | Leaf | 208.820 |
| SRR9715741 | Leaf | 256.371 |
| SRR9715739 | Root | 333.132 |
| SRR9715742 | Root | 323.889 |
| SRR9715743 | Root | 314.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 250.325 |
| SRR8749028 | MeJA induced 9h | 463.984 |
| SRR8749029 | MeJA induced 9h | 301.695 |
| SRR8749030 | Uninduced | 253.211 |
| SRR8749031 | Uninduced | 448.460 |
| SRR8749032 | Uninduced | 475.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 209.681 |
| SRR8400027 | Control - Root | 157.550 |