Gene detail information of Glyur000888s00023082.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71220.2 | 0 | UDP-glucose:glycoprotein glucosyltransferases;transferases, transferring hexosyl groups;transferases, transferring glycosyl groups |
| NR | XP_004485494.1 | 0 | PREDICTED: LOW QUALITY PROTEIN: UDP-glucose:glycoprotein glucosyltransferase-like [Cicer arietinum] |
| Swissprot | tr|Q0WL80|UGGG_ARATH | 0 | UDP-glucose:glycoprotein glucosyltransferase (Precursor) |
| trEMBL | tr|I1KUN0|I1KUN0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G20020.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00888 | 51308 | 66580 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT24 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K11718 | HUGT | EC:2.4.1.- | Protein processing in endoplasmic reticulum | map04141 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000888s00023082.1 | PF06427.6 | UDP-g_GGTase | 958 | 1163 | 2.10E-65 |
| Glyur000888s00023082.1 | PF01501.15 | Glyco_transf_8 | 1299 | 1511 | 6.40E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.949 |
| SRR1783600 | control | 31.952 |
| SRR1783602 | moderate drought stress | 34.278 |
| SRR1811619 | moderate drought stress | 33.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.593 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.366 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.122 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.050 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.752 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.737 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.001 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 56.783 |
| SRR2868004 | Drought Stress (root) | 45.848 |
| SRR2967015 | Control (root) | 42.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.107 |
| SRR9715740 | Leaf | 20.790 |
| SRR9715741 | Leaf | 22.986 |
| SRR9715739 | Root | 2.939 |
| SRR9715742 | Root | 29.141 |
| SRR9715743 | Root | 23.518 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.823 |
| SRR8749028 | MeJA induced 9h | 20.326 |
| SRR8749029 | MeJA induced 9h | 13.149 |
| SRR8749030 | Uninduced | 4.910 |
| SRR8749031 | Uninduced | 4.912 |
| SRR8749032 | Uninduced | 4.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.228 |
| SRR8400027 | Control - Root | 35.833 |