Gene detail information of Glyur000888s00023075 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10890.1 | 5.00E-05 | |
| NR | XP_010274311.1 | 1.45E-60 | PREDICTED: uncharacterized protein At1g10890-like [Nelumbo nucifera] |
| Swissprot | tr|P0CB26|Y1089_ARATH | 1.00E-31 | Uncharacterized protein At1g10890 |
| trEMBL | tr|K7M9N1|K7M9N1_SOYBN | 4.00E-57 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G05170.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00888 | 4 | 769 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000888s00023075.1 | PF15346.1 | ARGLU | 1 | 118 | 3.60E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.146 |
| SRR1783600 | control | 13.849 |
| SRR1783602 | moderate drought stress | 23.566 |
| SRR1811619 | moderate drought stress | 23.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.116 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.005 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.496 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 34.120 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 38.980 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 37.745 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.457 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.439 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.165 |
| SRR2868004 | Drought Stress (root) | 37.307 |
| SRR2967015 | Control (root) | 30.926 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.189 |
| SRR9715740 | Leaf | 15.326 |
| SRR9715741 | Leaf | 11.539 |
| SRR9715739 | Root | 0.350 |
| SRR9715742 | Root | 3.618 |
| SRR9715743 | Root | 2.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.121 |
| SRR8749028 | MeJA induced 9h | 12.196 |
| SRR8749029 | MeJA induced 9h | 15.559 |
| SRR8749030 | Uninduced | 42.492 |
| SRR8749031 | Uninduced | 40.180 |
| SRR8749032 | Uninduced | 102.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.314 |
| SRR8400027 | Control - Root | 21.377 |