Gene detail information of Glyur000885s00041681.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G08950.1 | 2.00E-114 | Phosphate-responsive 1 family protein |
| NR | XP_004516719.1 | 0 | PREDICTED: uncharacterized protein LOC101502011 [Cicer arietinum] |
| Swissprot | tr|Q9ZPE7|EXO_ARATH | 5.00E-151 | Protein EXORDIUM (Precursor) |
| trEMBL | tr|G7KBB9|G7KBB9_MEDTR | 0 | Phosphate-responsive 1 family protein {ECO:0000313|EMBL:AES98100.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00885 | 6939 | 7907 | + |
Gene family
| Gene family | subfamily |
|---|---|
| EAR motif-containing Proteins | other |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000885s00041681.1 | PF04674.7 | Phi_1 | 41 | 322 | 7.00E-128 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 32.634 |
| SRR1783600 | control | 32.091 |
| SRR1783602 | moderate drought stress | 46.260 |
| SRR1811619 | moderate drought stress | 45.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 486.996 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 475.119 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.412 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.462 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1632.275 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1622.136 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 36.045 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 35.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 84.886 |
| SRR2868004 | Drought Stress (root) | 92.181 |
| SRR2967015 | Control (root) | 152.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 372.249 |
| SRR9715740 | Leaf | 331.507 |
| SRR9715741 | Leaf | 328.364 |
| SRR9715739 | Root | 1317.866 |
| SRR9715742 | Root | 1643.044 |
| SRR9715743 | Root | 1515.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1522.725 |
| SRR8749028 | MeJA induced 9h | 1061.950 |
| SRR8749029 | MeJA induced 9h | 1508.039 |
| SRR8749030 | Uninduced | 1905.431 |
| SRR8749031 | Uninduced | 1113.960 |
| SRR8749032 | Uninduced | 1465.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 51.041 |
| SRR8400027 | Control - Root | 205.246 |