Gene detail information of Glyur000881s00037829 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61510.1 | 2.00E-37 | GroES-like zinc-binding alcohol dehydrogenase family protein |
| NR | XP_003540546.1 | 2.78E-49 | PREDICTED: probable quinone oxidoreductase-like [Glycine max] |
| COG | YP_643721.1 | 2.00E-25 | zinc-binding alcohol dehydrogenase [Rubrobacter xylanophilus DSM 9941] |
| trEMBL | tr|I1LVH0|I1LVH0_SOYBN | 1.00E-49 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G36990.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00881 | 97133 | 97405 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000881s00037829.1 | PF13602.1 | ADH_zinc_N_2 | 35 | 88 | 1.10E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.825 |
| SRR1783600 | control | 1.059 |
| SRR1783602 | moderate drought stress | 1.130 |
| SRR1811619 | moderate drought stress | 1.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.376 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.603 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.054 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.948 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.867 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.932 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.083 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.620 |
| SRR2967015 | Control (root) | 0.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.850 |
| SRR9715740 | Leaf | 1.360 |
| SRR9715741 | Leaf | 0.787 |
| SRR9715739 | Root | 9.118 |
| SRR9715742 | Root | 2.054 |
| SRR9715743 | Root | 4.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.261 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.572 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.770 |
| SRR8400027 | Control - Root | 5.342 |