Gene detail information of Glyur000879s00025354 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G23760.1 | 2.00E-18 | Copper transport protein family |
| NR | XP_002510790.1 | 1.87E-33 | metal ion binding protein, putative [Ricinus communis] |
| trEMBL | tr|B9R9B5|B9R9B5_RICCO | 7.00E-34 | Metal ion binding protein, putative {ECO:0000313|EMBL:EEF51392.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00879 | 58940 | 60025 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.328 |
| SRR1783600 | control | 0.415 |
| SRR1783602 | moderate drought stress | 0.454 |
| SRR1811619 | moderate drought stress | 0.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.892 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.820 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.574 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.355 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.829 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.888 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.535 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.053 |
| SRR2868004 | Drought Stress (root) | 3.666 |
| SRR2967015 | Control (root) | 0.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.819 |
| SRR9715740 | Leaf | 28.678 |
| SRR9715741 | Leaf | 19.059 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.012 |
| SRR9715743 | Root | 0.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.394 |
| SRR8749028 | MeJA induced 9h | 0.234 |
| SRR8749029 | MeJA induced 9h | 0.707 |
| SRR8749030 | Uninduced | 0.528 |
| SRR8749031 | Uninduced | 1.072 |
| SRR8749032 | Uninduced | 0.490 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.540 |
| SRR8400027 | Control - Root | 0.770 |